Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2979 |
Symbol | |
ID | 9246832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3556430 |
End bp | 3557905 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_003680895 |
Protein GI | 297561921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.313455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTGA GCGAACTGCT GTACGGCCAC GACCACCAGG TACTGCACGG AGACCAGGAC ACACCGATCA CCTCGGGGCC GTGCCTGGAC GCCGACCGCG TGACCCCCGG TTCGCTCTAC GTCGCTCTGC CGGGACACCG CGCGGGCGGT CCCGAGGCAC TCGGGGAGGC GCTCGCACGC GGGGCCGCCG CCGTGCTCGT CGAGGGGCCG GACCCGGCCG GACACCGGCC GGCGGACACC GGCGCGTGCG TGGTCCGGGT ACCGGACGCG CGGATCGCGA CGGCACTCGT CTCGGCGCGC TACCACGGCG AACCGGGACG CGCCATGGAC GTGGTCGCCG TCACCGGCAC CAACGGCAAG ACGTCGGTGT CGTCCATGTA CGAGTCGCTG CTGACGCTCT CCGAGGGGGC CCGGGTGGGG GTCATCGGAA CCTCCGGGGC CCGGGTCGGC GGCGCCCCCA TCCCCATGCC GAGATCCGTG CTGAGCACAC CGGAGTCACC GGACCTCCAG TACCTGCTGG CGTGTATGCG CGACCGGGGC GGCGACAGCG TCGTGCTGGA GGCGACGTCG ATGGGACTGC TGAACCACAG GGTGGACGGC TCCTTCGTCG ACGTCGGGGT CTTCACCAAC CTGACCCAGG ACCACCTGGA CGACCACGGC ACGATGGAGA GCTACACCAG GGCGAAGATG CTCCTGTTCC AGGGCATGTG CCGACGCGCC GTGGTCAACG CCGACGACCC CGTGGGCGCC GCGATCCCGG CCCTGATGCC CGGCGCCGTG ACCACCTACG CCGTCGACGC GGACGCGGAC TACCGGGCGA CCGACCTGGT CGTCGACTCT TCGGGAACGC GGTTCGTCCT GCACCACGAC GGCCGCAAGT ACCCGGCGGC GATCCCCGTC CCGGGCCGGT TCTCGGTGTC CAACGCGCTG GCCGCGGTGG CGGCCTGCCA CGTCCTGGGC CACGACCTGG ACGCACTGGT GGACGCCCTC GACCGGATGC CGCAGATCCC GGGCCGGTTC GAGCACTTCG GTACACCCGA GGGGGTCTCC GTCATCGTGG ACTACGCCCA CTCGCCCGAC TCGCTGGACA AGGTCCTGTG CACGATCCGC GGATTCGCCC CGCGACGGGT GCTCACCGTC TTCGGCTGCG GCGGCGACCG GGACACCACC AAGCGCGCCC GGATGGGCGA GATCGCGGCC ACCTACTCCG ACCTGTGCGT CCTCACCTCG GACAACCCCC GCTACGAGGA CCCGGAGGCG ATCATGGACC AGGTCGCCCC GGGCATCGAG GCGGTCGGCA CACCCTTCGC ACGGGTCGGC GACCGGCGCG GGGCCATCGC CCTCGCGCTG TCCTCGGCCG AACCGGGCGA CGTCGTCCTG GTCGCGGGCA AGGGCAGCGA GACCCACCAG AGCGTCGGCG GCGACCTCGT TCCCTTCGAC GACATGACGG TCGTGCGCGG CCTCGCCCGC GCCTGA
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Protein sequence | MKLSELLYGH DHQVLHGDQD TPITSGPCLD ADRVTPGSLY VALPGHRAGG PEALGEALAR GAAAVLVEGP DPAGHRPADT GACVVRVPDA RIATALVSAR YHGEPGRAMD VVAVTGTNGK TSVSSMYESL LTLSEGARVG VIGTSGARVG GAPIPMPRSV LSTPESPDLQ YLLACMRDRG GDSVVLEATS MGLLNHRVDG SFVDVGVFTN LTQDHLDDHG TMESYTRAKM LLFQGMCRRA VVNADDPVGA AIPALMPGAV TTYAVDADAD YRATDLVVDS SGTRFVLHHD GRKYPAAIPV PGRFSVSNAL AAVAACHVLG HDLDALVDAL DRMPQIPGRF EHFGTPEGVS VIVDYAHSPD SLDKVLCTIR GFAPRRVLTV FGCGGDRDTT KRARMGEIAA TYSDLCVLTS DNPRYEDPEA IMDQVAPGIE AVGTPFARVG DRRGAIALAL SSAEPGDVVL VAGKGSETHQ SVGGDLVPFD DMTVVRGLAR A
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