| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2948 |
|---|
| Symbol | |
|---|
| ID | 9246801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3522546 |
|---|
| End bp | 3523808 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, PucR family |
|---|
| Protein accession | YP_003680864 |
|---|
| Protein GI | 297561890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0167209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACCG AACCCCACCA GACCCCGGAC GACCAGGGCA CCGCGGCGGA CCCGGAGGGC
GCACCCGCCT CCGTGCCCAC GGAGCAGGAA CGCGTGCGCG CGGAGACCGT GCGCCGCCTG
GAGCGCTCCA TGGGCGCGCT CGGCACGGCC GCCGTGGCCC GCATGGAACA GCGCCTGGGC
TGGTTCCGCC GGATGTCGGC CGAGGACCGC TCGTGGATCG GACTGGTCGC CCAGTCCGGG
GTGGCCGCCT TCGTCGACTG GTTCCGCAAC CCGGTGCGCG GCCGCCCGGC CATCACCGTC
GAGGTCTTCG GCACCGCGCC GCGCGAGCTC ACGCGCTCGG TCTCCCTCCA GCAGACCGTC
GACATGATCC GCGTGGTCAT CGACGTGGTC GAGGGACAGG TGGAGGAGCT GGCCGCCCCC
GGCGGAGCCC AGCAGCTGCG CGAGGCCGTG CTGCGCTACA CGCGCGAGGT GGCCTTCAGC
TCCGCGAAGG TCTACGCGCG CGCCGCCGAG GCGCGTGGCG CGTGGGACGC GCGCCTGGAG
GCCCTGATCG TGGACGCCCT GCTGCACGGC GACCAGGAGG ACGGCCTCCA GACGTGGGGT
TCGGCGCTGA GCTGGTCGCA CACCCCGGTC GTCGCGGTGG CCGGGGAGGT CGGCGACGAC
GACGGCGGCA AGGTCCTGGA CGACCTGCGC TCGGCCGCGC GCCGCCTCGG CCACGACGTG
CTGGCCGGGA TGCAGGGACG TCGCGTGGTC GTGGTGATCG GCGTGGGGGA CCGCTACCCG
GCGCAGGACC TGCCCGCGGC CGCCGCCGAA CCGCTGGCCG GGCTCTTCGG CTCGGGCCCG
GTGGTGGTGG GGCCCGCCGT CCCCGACCTG CGGTCCGCGG GGGCCTCGCT GCGCGCCGCG
GTCAACGGAC TGCGAGCCGC GGTGGCCTGG CCGGACGCGC CGCGCCCGGT CCTCGCCGAC
GACCTGCTGC CCGAGCGCGC GCTCCAGGGC GAGGCCGAGG CGCGCAGGCA GCTGGTCGAG
GAGGTGTACG TGCCCCTGCT GGGCGCGGGG TCGCCCCTGC TGGACACCCT GTCGGTGTAC
CTGGAGCACG CCTCGTCGCT GGAGGCCACC GCGCGGATGC TGTTCGTGCA CCCCAACACG
GTCCGCTACC GGCTCAGCCG GATCGCCGAG CTCACCGGGC GCACGCCCTC CGACGGGCGC
GGCTCCTTCG TCCTGCGGGT GGCGGTCGCC CTCGGGCGGC TCGCGCGGAC CGACGGCGCC
TGA
|
|---|
| Protein sequence | MNTEPHQTPD DQGTAADPEG APASVPTEQE RVRAETVRRL ERSMGALGTA AVARMEQRLG
WFRRMSAEDR SWIGLVAQSG VAAFVDWFRN PVRGRPAITV EVFGTAPREL TRSVSLQQTV
DMIRVVIDVV EGQVEELAAP GGAQQLREAV LRYTREVAFS SAKVYARAAE ARGAWDARLE
ALIVDALLHG DQEDGLQTWG SALSWSHTPV VAVAGEVGDD DGGKVLDDLR SAARRLGHDV
LAGMQGRRVV VVIGVGDRYP AQDLPAAAAE PLAGLFGSGP VVVGPAVPDL RSAGASLRAA
VNGLRAAVAW PDAPRPVLAD DLLPERALQG EAEARRQLVE EVYVPLLGAG SPLLDTLSVY
LEHASSLEAT ARMLFVHPNT VRYRLSRIAE LTGRTPSDGR GSFVLRVAVA LGRLARTDGA
|
|---|
| |