Gene Ndas_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2896 
Symbol 
ID9246747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3459199 
End bp3460218 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content73% 
IMG OID 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_003680813 
Protein GI297561839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.595289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.685255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCCCG TTCTGAAGAA CGGGGCGTTC ACGCCCAACA ACGAGATGAC TGACGCCATC 
CGCGCGGAGG GCCTGGTCAA GCAGTTCAAG GGCAAACGGG CCCTGGACGG CGTGGACCTG
AGGGCCAGGA CGGGGGCCGT GCTGGGCGTC CTGGGACCCA ACGGCTCCGG GAAGACCACG
ACGGTGCGCA TCCTGGCGAC CCTGCTGCGC CCCGACGGGG GGCACGCCGA GGTGGGCGGC
TTCGACGTGG CGCGCCAACC CCACGAGGTG CGCCGCCTGA TCGGGCTGAC CGGCCAGTAC
GCGGCGGTCG ACGCCGACCT GACCGGAACC CAGAACCTCG TGCTGATCGC CCGGCTGCTG
GGCTTCGACC GGGCCGGGGC GCGGGCGCGC TCGGCGGAGC TGATGGAGCG CTTCGAGCTC
TCCGACGCCG CCGGCCGCCC CGCCAAGACC TACTCGGGCG GCATGCGCCG ACGGCTGGAC
CTGGCCGCGA GCCTGGTCGG CCGCCCGTCG CTGCTGTATC TGGACGAGCC GACCACCGGC
CTGGACCCGC ACAGCCGCAA CGGGCTGTGG GACGTGGTGC GCGGCCTGGT CGACGACGGC
GTGACCGTCC TGCTCACCAC CCAGTACCTG GAGGAGGCCG ACCAGCTGGC CGACGACCTC
ATGGTGCTCG ACCACGGCCG GGTGATCAGC GAGGGCACGC CCGAGGAGCT CAAGAGCCGG
GCGGGCAACC AGGTGCTGGA GGTGCGCACC GTCGAGACCG GACAGCTGTC CCTGGCCACC
GGGATCATCG AGGCGGTCAC CAGCACGCCG GTGACCTCCG ACGGGCTGCT GGCCAGCGTC
CCGGTCACCG ACTCGGCGGT CCTGCCCGAG GTGGTGCGCC GCCTGGACGA GCAGGGCGTG
GCCGTCGCCG AACTGTCACT GCGCAAGCCC AGCCTGGACG AGGTCTTCCT CGCCCTGACC
GGGCACGCCG CCGAGGAGGA GGCCCCCCGG GGGGCCGTTG ACGAAGGGAC ACGAGCTTGA
 
Protein sequence
MSPVLKNGAF TPNNEMTDAI RAEGLVKQFK GKRALDGVDL RARTGAVLGV LGPNGSGKTT 
TVRILATLLR PDGGHAEVGG FDVARQPHEV RRLIGLTGQY AAVDADLTGT QNLVLIARLL
GFDRAGARAR SAELMERFEL SDAAGRPAKT YSGGMRRRLD LAASLVGRPS LLYLDEPTTG
LDPHSRNGLW DVVRGLVDDG VTVLLTTQYL EEADQLADDL MVLDHGRVIS EGTPEELKSR
AGNQVLEVRT VETGQLSLAT GIIEAVTSTP VTSDGLLASV PVTDSAVLPE VVRRLDEQGV
AVAELSLRKP SLDEVFLALT GHAAEEEAPR GAVDEGTRA