Gene Ndas_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2895 
Symbol 
ID9246746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3457895 
End bp3459112 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003680812 
Protein GI297561838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.56532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.682802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGGG CGTTTCGGTA CCGCTTCTAT CCGAGTGATG CGCAGGCGGC TGAGCTGTCG 
CGCACGTTCG GGTGCGTGCG CCTGGTCTAC AACCGCGCTC TGGCCGAACG CACCGCCGCC
TGGCACACCG AACAGCGGCG GCTCTCCTAC ATCGACTCCT CCGCGGCGCT GACCGCGTGG
AAGAGGACCG AGGAGCTGTC CTTCCTCACC GAGGTCTCCT GCGTCCCGCT CCAGCAGACG
CTGCGCCACC TGCACACGGC CTTTCGCAAC TTCTTCGACA AGCGTGCGCG GTACCCGCGG
TTCAAGTCGA AGAAGACCTC GCGCGCCAGC GCGGAGTACA CCCGGTCCGC GTTCCGCTAC
CGCGACGGCC GCCTGACCCT GGCCAAGATG ACCGAACCCC TGGACATCGT GTGGTCGCGG
CCCTTGCCCG CAGACGCACG GCCGTCCACG GTGACGGTCT CGCGCGATGC GGCCGGGCGC
TGGTTCGTCT CGTTGCTGTG CGAGGACACC GTCGAGTCGG CTCCGGCCGC CAACGACGCG
GTGGGTGTGG ACATGGGTGT GACCTCGCTG GTGGTGTTGT CCACGGGGGA GAAGGTGGCC
AACCCCCGCC ACGAGCGACG CGACCGCGCC AGGCTGGCCA AGGCCCAGCG AGCGCTGGCC
CGTAAGGCCA AGGGCAGCGC GAACCGGGGC AGGGCCCGGC GGAAGGTGGC GCGGGTGCAC
GCCCGCATCA CCGACCGCAG GCGCGACTTT TTGTACAAGC TCTCCACTCG ACTCGTCCGC
GAGAACCAAG CGGTCGTGAT CGAGGACCTG GCAGTACGCA ACCTGGTCAA GAACCGCGGG
CTCGCCCGGG CGATCTCGGA TGTGGCCTGG CGTGAACTCC GGTCCATGTT GGAGTACAAG
GCGCGGTGGT ATGGGCGGGA TCTGGTCGTG GTGGACCGGT TCTTTCCTTC CTCCAAGGCG
TGCTCGACGC CCGGCTGCGG CTACGTGCAT GTGTCGTTGC CGCTGCGCGT GCGGGAGTGG
AGGTGCCCCC AGTGCGGCAC CACCCATGAC CGCGATGTGA ACGCTGCGAA TAACCTCAGG
GCCGCCGGGC TGGCGGCATC TGCCTGCGGA GCTGGTGTGA GACCTCAACG GAAGTCCTCC
CGGACGGGGC GACCGGCAAT GAAACAGGAA GGTCACGGGG TGACCCGTGA CGAGGCTGTG
GCCTCGAACC ACCGGTAG
 
Protein sequence
MKRAFRYRFY PSDAQAAELS RTFGCVRLVY NRALAERTAA WHTEQRRLSY IDSSAALTAW 
KRTEELSFLT EVSCVPLQQT LRHLHTAFRN FFDKRARYPR FKSKKTSRAS AEYTRSAFRY
RDGRLTLAKM TEPLDIVWSR PLPADARPST VTVSRDAAGR WFVSLLCEDT VESAPAANDA
VGVDMGVTSL VVLSTGEKVA NPRHERRDRA RLAKAQRALA RKAKGSANRG RARRKVARVH
ARITDRRRDF LYKLSTRLVR ENQAVVIEDL AVRNLVKNRG LARAISDVAW RELRSMLEYK
ARWYGRDLVV VDRFFPSSKA CSTPGCGYVH VSLPLRVREW RCPQCGTTHD RDVNAANNLR
AAGLAASACG AGVRPQRKSS RTGRPAMKQE GHGVTRDEAV ASNHR