Gene Ndas_2726 details

Gene Information

• Locus tag: Ndas_2726
• ID: 9246577
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014210
• Strand: +
• Start bp: 3253440
• End bp: 3256613
• Gene Length: 3174 bp
• Protein Length: 1057 aa
• Translation table: 11
• GC content: 72%
• Product: helicase domain protein
• Protein accession: YP_003680645
• Protein GI: 297561671

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.48932
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCAGCA GCACCACAGA GGACCCCTCC TCTGCTTCCC AGAAGCTCTC CCCCGGCGCG 
CTCGTCGAGG TACGCGGCCA GAAGTGGGTG GTCAGCGGGG TCGAACCCGG CGACGCCTTC 
ACGATGGTCA CCCTCCAGAG CATCCAGGAG GGCCGCTACG GCGAGACCCT CGACGTCCTG 
TGGGAGGTCG AGCCCGGCCG CAGACTCCTG CCCAGCGGTT CCCTCCCCGA CATCGCGGGC 
ATCAGCCCGG ACCGCCCCGA GCAGCTCGCC GCCTTCCTCG ACGCCGTGCG CTGGTCGGCG 
GTCACCTCCG CCGACGTGCG CAGCCTCCAG GCGCCCTTCC GCTCCGGCGT GGCCATCGAG 
GACTACCAGC TCGAACCGGT CTCGCGCGCG CTCGGCGCCC CCCGCGTCAA CCTGCTGCTC 
GCCGACGACG TCGGCCTGGG CAAGACCATT GAGGCCGGGC TGGTCGCCCA GGAGCTGCTG 
CTGCGCAACC GCACCCAGCG GATCATGATC GTGTGCCCGG CCGGTCTGAC CCTGAAGTGG 
AAGGAGGAGA TGCAGGAGAA GTTCGGCCTG GACTTCACCA TCGTCGACTC CGAGTGCGCG 
GCGGCCGTGC GCCGCGAGTA CGGCAGCGCC GCCAACCCGT TCAAGGTACA CAGGCTCACC 
ATCGTCAGCC TGCCGTGGCT GCGCGGCGCC AAGGCCCAGC GCCTGCTGGA CGAGGTCCTG 
CCCGCCGACG GCCCCGGCTA CCCGCGCGCC TTCGACCTGC TCATCCTGGA CGAGGCCCAC 
CACGTGGCCC CGGCCGCGCC CAAGCAGGTG TACGCGGTCG ACTCCCAGCA GACCAAGCTG 
ATGCGCAAGC TGGCCCCGCA CTTCACGCAC CGGCTGTTCC TGTCCGCGAC CCCGCACAAC 
GGCTACCAGC AGTCCTTCAC CGCGCTGCTG GAGATCCTGG ACGACCAGCG CTTCGCCCGG 
GGCGTGGACC CGAACGCCTC GGCGGTCTCC GACACCGTGG TGCGCCGCCT CAAGCGCGAG 
GTGGAGAACG ACGACGGCAG CCCCCGCTTC CTGGAGCGCG TCACCAGGGA ACTCCAGGTC 
GCCTACCCCG ACAGCGAGCG GGAGATCCAC GCCCTGCTCA CCCGCTTCGC CGAGCTGCGC 
CGGGCCAAGC TCACCACGAA GAAGGGCAGG CGGGCCACCG ACCTGGTCAC CCTGCTGCTC 
AAGAAGCGCC TGTTCTCCAG CCCCGCCGCC TTCGCGCACA CCGTCGGCGT CTACACCGAG 
ACGCTGCGCT CGCGCGGCGG TGACGCCCTC CCCTCGGGCG CCGACCTGGA CGAGGTGCCC 
GAGTGGATGG ACGACTGGTG GGACGAGACC GCCACCTATG ACGACGAGGA GCTGGCCGAG 
GCCGAGGACG ACGCCCTGGG CCGCGCCCGC CCCCTCCAGC CCGACGCCGA CGAGACCGAG 
GAGTCGCTGC TGGAGCGGAT GCACGCCTGG GCTCGGACGC ACGAGGCCCA GCCCGACGCC 
AAGGCCCGCA GGCTCATCGA CCACCTCAAG GCCATCTGCA AGCCGGACCG GCACTGGACC 
AACGAGCGCG TGGTGGTCTT CACCGAGTAC CGCGACACCC AGTCCTGGCT GCGCTCGCTG 
CTGGCCCAGG CCGGGCTGGG CGGCGAGCAG GTCAAGGAGC TGCACGGCGG GATGTCCACC 
GAGGAGCGCG AGGCGCTGCG GGTGGCCTTC CAGAAGGACC CGGGCGAGCA CCCGCTGCGC 
ATCCTCATCG CCACCGACGC CGCCAGCGAG GGCATCGACC TCCAGCGGCA CTGCCACCGC 
CTGGTCAACT ACGACATCCC CTTCAACCCC AACAAGCTGG AACAGCGCAT CGGCCGCATT 
GACCGGTACG GGCAGGAGAA CCCCCCCGAG GTCTTCCACT TCGTGGGCAC CGGCTGGGAG 
AAGGCCACCG ACTCCTACGA GGCCGACCTG GAGTTCCTGT CCCGCGTGGC CACCAAGGTC 
GCCCGTATGG AGGAGGACCT TGGCTCGGTC AACGCGGTGA TCTCCGACGC CGTACAGCGC 
CGGATGCTCG GTCAGAGCGC CGACCTGGAC GCCGAGACCG CCAAGGCGGG CGGCAAGGGC 
CGGGTGCCCT CCGACTCCAA CATCCGCGAG CGGGTGCGCC GCCTGCGCCG CAACCTGGAC 
GAGACCGTGG AGTCGCTCGC CCTGACCCCC GACCGGGTCA AGCGGGTGGT GGACACCGCC 
CTGGACCTGG CGCGGCAGCC TGGGCTGCGC CCCCACGTCG ACGAGGACGA GGAGCGCGCC 
GCCCAGGACC TGTACGAGGT CCCGTCCTTC ACCGGATCGT GGGTCAAGGC CGCCGACGGG 
CTGCTGGAGA AGGCCTCGCA CGGCGCCCCC AAGGGCGCCG AGCTGCGCCA GCTGCCGGTG 
ACCTTCGACG CCCAGTCCGC CAAGGGCCGC GACGACGTGG TGCTCGCCCA CCTCAACCAC 
CCGCTGGTGT CCCGGTCGAT CGGGCTGCTG CGCACGGCGG TGTCCAACGA CCGGGTGGGC 
CTGAACCGGG TGACGGCCGT GGTCAGCGAG GACCCGGAGC TGGAGGACGT GCTGGTCGGC 
GCCTACTCGC GGTTCGTGTT GGTGGGCGCG GACGGGCTGC GCCTGCACGA GGAGGTGCTG 
CACTCGGGCG GGTGGCTGCC CGAGACGGGC CGGTTCCGTC GCCTGGAGAA CCTGGGCACC 
CTGGGCGGCA TCCTCAACCG CGCCCTGGAC AGCGGCCGAC CGCTGTCGGA CGCGGTGTGG 
AACCGCGTGC GGGAGCGCTG GGAGCGGGCG GGCGGCCGCG CGGGCCTGGA GCGGGCCATC 
GAGTGGCGCG CCGACACCCG CCTGGAGTCG CTCAAGCGCG TACTGGCCGA GCGCGAGGAG 
AACGAGCGCG CCAGGGTGAC CGGCGTCCTG GACCAGTTCG CCGCGTCCCT GCGCGAGGCG 
CTGGCGGGCG ACGACGACGA GGACGCCCTG TTCGGGCGCT CCCTCACCCA GACCAAGGAA 
GAACGTGAGC AGTACCGCAA GGACCGGATG AACTGGGAGA GGCGGCTCGC CGCCCTGGAC 
GGCGAGCGCG AGCGTGAGCT GGCGGCCATC GCCGAGCGCT ACTCGCGGCA GGACCCGCAC 
ACCTTCCCCG TCGCCGTCGT CTTCGTCGTT CCCCGTAAGG AAGCCATCCG ATGA 

 

Protein sequence

MPSSTTEDPS SASQKLSPGA LVEVRGQKWV VSGVEPGDAF TMVTLQSIQE GRYGETLDVL 
WEVEPGRRLL PSGSLPDIAG ISPDRPEQLA AFLDAVRWSA VTSADVRSLQ APFRSGVAIE 
DYQLEPVSRA LGAPRVNLLL ADDVGLGKTI EAGLVAQELL LRNRTQRIMI VCPAGLTLKW 
KEEMQEKFGL DFTIVDSECA AAVRREYGSA ANPFKVHRLT IVSLPWLRGA KAQRLLDEVL 
PADGPGYPRA FDLLILDEAH HVAPAAPKQV YAVDSQQTKL MRKLAPHFTH RLFLSATPHN 
GYQQSFTALL EILDDQRFAR GVDPNASAVS DTVVRRLKRE VENDDGSPRF LERVTRELQV 
AYPDSEREIH ALLTRFAELR RAKLTTKKGR RATDLVTLLL KKRLFSSPAA FAHTVGVYTE 
TLRSRGGDAL PSGADLDEVP EWMDDWWDET ATYDDEELAE AEDDALGRAR PLQPDADETE 
ESLLERMHAW ARTHEAQPDA KARRLIDHLK AICKPDRHWT NERVVVFTEY RDTQSWLRSL 
LAQAGLGGEQ VKELHGGMST EEREALRVAF QKDPGEHPLR ILIATDAASE GIDLQRHCHR 
LVNYDIPFNP NKLEQRIGRI DRYGQENPPE VFHFVGTGWE KATDSYEADL EFLSRVATKV 
ARMEEDLGSV NAVISDAVQR RMLGQSADLD AETAKAGGKG RVPSDSNIRE RVRRLRRNLD 
ETVESLALTP DRVKRVVDTA LDLARQPGLR PHVDEDEERA AQDLYEVPSF TGSWVKAADG 
LLEKASHGAP KGAELRQLPV TFDAQSAKGR DDVVLAHLNH PLVSRSIGLL RTAVSNDRVG 
LNRVTAVVSE DPELEDVLVG AYSRFVLVGA DGLRLHEEVL HSGGWLPETG RFRRLENLGT 
LGGILNRALD SGRPLSDAVW NRVRERWERA GGRAGLERAI EWRADTRLES LKRVLAEREE 
NERARVTGVL DQFAASLREA LAGDDDEDAL FGRSLTQTKE EREQYRKDRM NWERRLAALD 
GERERELAAI AERYSRQDPH TFPVAVVFVV PRKEAIR