Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2702 |
Symbol | |
ID | 9246553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 3222954 |
End bp | 3223808 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | helix-turn-helix domain protein |
Protein accession | YP_003680623 |
Protein GI | 297561649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.590252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGTT CCCGACCCCC CGCGGTCAGA CGCGATCTCG GCGCCTTCCT GCGCACCCGA CGCGAACGGC TCACCCCGGA CCAGGTGGGG CTTCCCAGCA CCGGACGCCG TCGCACGCCC GGCCTGCGCC GCGAAGAGGT CGCGGTGCTC GCCGGAGTCG GCGTCACCTG GTACACCTGG CTCGAACAGG GCCGACCGAT CAACGTCAGC GCGCAGGTCC TGACCGCGGT CGGCAGAGCC CTTCGCCTGG ACGACACCGA GAAGCGACAC CTGGAACGCC TCGCCGGTGC GCGTACCCGG TCGACCGCTC CGTTGGCACT CGACGCGTCG CTGTCGACGG CCTACCAGCC GGTACTGGAC AAACTCGACC CCTACCCCGC CTGCCTGCAG ACCAGCGCGT TCGACGTGGT GGCCTACAAC CTCCCCTACC GCTTCCTGTT CACGGACATG GACCGGATAC CGCCCGCTGA GCGGAACTGC GCGTTGCAGT TCTTCACCAA CGCCGACTGG CGCAGCCGCT ATGTCGACGA CGACGTCGTC GCCGCTCGGA TGGTCGCACA GCTGCGCGCG GTCGCCGGCA CCGACACAGG CCACACCGCG AGCACCACGG TCCGGGAGCT GCGGCAGCGG TCGGAGGAGT TCTCGCGGCT GTGGGACCGG CACGACGTCA TGCTCCAACA CCTGGAGACC AAACGACTGG ACAGTCCACG GGTCGGCTTG CTGCGCCTGA ACTTCGTCTC GTCCAACGTC GCGGAGACCG GTCACCGCCT GACCGTGATG ACACCAGCCG ACGAGACCAC CTCGCAGCGG CTCCTCCGGC TGTCAGAAGT GGACGTCGAC GCCCAGCGCG GATGA
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Protein sequence | MTGSRPPAVR RDLGAFLRTR RERLTPDQVG LPSTGRRRTP GLRREEVAVL AGVGVTWYTW LEQGRPINVS AQVLTAVGRA LRLDDTEKRH LERLAGARTR STAPLALDAS LSTAYQPVLD KLDPYPACLQ TSAFDVVAYN LPYRFLFTDM DRIPPAERNC ALQFFTNADW RSRYVDDDVV AARMVAQLRA VAGTDTGHTA STTVRELRQR SEEFSRLWDR HDVMLQHLET KRLDSPRVGL LRLNFVSSNV AETGHRLTVM TPADETTSQR LLRLSEVDVD AQRG
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