Gene Ndas_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2612 
Symbol 
ID9246463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3111291 
End bp3115574 
Gene Length4284 bp 
Protein Length1427 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003680535 
Protein GI297561561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.251677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA GGAGCGACCG ATTCCGGCCC AGCCGCGCCG GCGTGATCAA CGTCTGGGAC 
TACGTCGACG AGGAGTTCGT GTTCGCCGAC GGACGCCTCG TCCTGCGCGG ACACAACGGC
TCGGGCAAGA CCAAGGCGTT GGAAGTGCTC TTCCCGTTCA TCCTGGACGG GTACACCGAC
GCCCGCCGTC TGGACCCCTT CAGCGGCCAG AACCGCACCA TGAAGTCCAA CCTGCTCTAC
CGAGGCCAGG ACTCCGAGTA CGGGTACGTG TGGATGGAGT TCGCCCGCAC CGGACCGGGG
GAGGGGACCG AGACGGTCAC CCTGGTCATC GGCCTGCGCG CGCACCGCCA CCGCGACGGC
GTGACCCCCT CCTTCTTCGT CACCGACCAG CGCCTGGGCG TGGACTTCGG CCTGCTCGCC
ACCGACGGCC GCCCGCTCAC CGAGCGGCAG CTCAAGGGGG TGCTCGGCGA GGACGCCTTC
CGCTCCACCG CGGCCGACTA CCGCCGCGCC GTGGACGCGC GCCTGTTCGG CCTGGGCGAG
CGCTACGTCC AGCTGCTCGA CCTGCTCCTG GCGCTGCGCC GCCCGCTGCT GGCCAAGGAC
CTGGACCCCG AGAAGGTCTC CGAGACCCTC ACCAGCGGCC TGAGCCCCCT GGACGAGGAA
CTCCTCGACC AGGCCGCCCG CGACTTCACC AACCTGGCCG CCGTCCAGCG CCGCTTCGAC
CAGGCCAGCA CGGCGCACGC CGCGACCACG GCCTTCGTCG GGGAGTACGC CGCCTACCTC
ACCGCCCACG CCCGCCACCG CCTGGCCCGC GTGCACACCG CCGCCGGGCA GACCGCCGAG
CAGGCCCGCG CCATCGCCGA GGCCCGCGAC ACCCGCGAGC GGGCCACGCT CGCGCACGCC
GCCGCCACCG GCCGGGCCGA GGAGCACGAC GCCCGGATCC GTCGGCTCGC CGCGCGCAGG
GGCGGTCTGG AGGCGCACGA GGCCTTCCGC AGCCACGCCG CCCTGGAGAT CGAACGCGCG
CACAGCGCCG AGACCGCCCG CGCCCTGGCC GAACAGCGGG CCAGACTGGA CGACCAGGCC
GGGGAGGTCA CCGCCCTCCA GCGTGAGGCC GACCGGGTCG CCGCCGACCT CGAACACGGG
CGGGCGCGCA CCGGTGAACT GGCCGCGGAG CTGGCCGAGA ACGCCGCACA GGCCGGGCTC
GACCACGACG GGGAGGGCCC CGCCGACACC GGCGACGACC TGTCCGCCGC CGCGCGGGCG
CGCGCGACCG CCCGCCGCGC CGACGTGGCC GCGGTCCGCG AGCGCCTCGC CGAACTCGCC
CGCGCCGAGA CCGCGCGCGG CGCCGCCGAA CGGGCCGCCG CCCAGGCCGA GGACAGGCTC
GGACGCGGCG AGGCGGAGTG CGCCCGCGCG GCCGACGACC TGGCCGCGGC CCGCGCCGGT
GCCGCCGACG CGCTCACCGC CTGGGCCGAG CACTGGGCCG AGGGGCCCGC CCCGGTCACC
GACGCCGCCT GCGTCGCGGC CCTGAGCGGG GCACTGGAGA GCGTCGGACG CCCCGGCACC
CCCACGGTGT CGGAGGTCTA CGGCGAGCAC ACCGACCAGC AGCGCCTGGA CGCCGCCGCG
CACACGCGCA CGCTGGAGAC CGACCGGGAC CGGCTCGGCG CCGAGATCGA CCGCCTCACC
CGCGAGCGCG CGGACATCGC CGCCGAACGC GACGACGCCC CGCCCGCCGA CGCGCTGCGC
ACCGCCTCCC GCGAGGGGAG CCCCGGCGCC CCGCGTGGCA GATGGTCCGC TTCGCCGACG
CGGTCGGCGA ACGACGAGGC CGCCGCCGTC GAGGGCGCCC TGCACGGTGC GGGCCTGCTC
ACCGCCTGGG TGCACCCCGA CGCCGACGCC ACCCGCGCGG CGCTCGCCTC GGGCGGGGCC
GACGCCTACC TGCTGCCCGC CGAGGGCGCG GCCGCGCCCG AGGGGCCCAC CCTGGCCGAC
GTGCTGGTGC CCGAGCGCCA GGACCGGGTC CCCGAGCACG TCATCGCCCG CGTCCTGGCG
TCGGTGCGCC TGGTCCGCGA CAGCGAGGGC TCGGCCGGGG CCACGGACAC CGTCCAGTCC
CTCGGGGCGG CTGACGCCAC GGGCGCCGGG GGAGCGGCGG CGCACACCGT CGGCACCGGC
GCGCGGTTCG CCCAGGGGGT GCTGGTGGGC GTCAGCCCCA AGGCCGCCCC CGAGTTCATC
GGCGCCACCA ACCGCGCCCA CCGCCGCCGC GAACGCCTGG CCGAGTGCGA CGCCCGCATC
GCCGAACTCG ACGAGCGGCG CGCACGGGTC GCCGAACAGC TCGACCGGGC GGGCGAACTC
CTCAAGGCCT TCACCCGGGC CCGCGCCGCC CTGCCCGAGA CCGCCCCGAT CGACCGGGCC
GTGCGCCGGG TCGACCAGCA GTCCACCCTC CTGGCCTCGG CGAGGGCCGA GAGCGAGGAG
CGCCGCCGCG ACCTCGACGC CGCGGTCGCC GAGGTCGACG CCCACCGCCA CCAGGTGCGC
GCGGTGGCCT CCGAACGCGC CATGCCCGCC CAGCCCGAGG CGGTGGACGC CGTCGCCCGC
GCCGTGGACG ACTTCCTGGA GACCGCGCGC CGCCTGCACA CCGCCCGCGC AGAAGTCGAC
CGGCACACCG TCGACCTGGA CGGCCGGAAG GAGACCCTGG ACCGCCTGCG CGCACGGCTG
GAGGAGGACC GCGAACGCCA CGAGGAGCGC ACCCGCGAGC ACGAGCGCGC CGCGGCCGAG
CTGGCCGCCA AGCAGGAGGG CATCGACGCC CCGGTCCGCG AGCTCATGGC CGAGCTCGAA
CAGGTCAAGG AGGAGCTGCA CCGGGCCCGT GAGGAGCACC AGGGCGCCCA GAAGGAGGCC
GCGGCCGCCC ACGAGGCCAT GATCCGGGCC GACGAGAAGC TGGAGGGCGG GCAGCGGGCC
CTCACCGACT CCCTCTCCGC GCTGTTCGAG CAGGCCGACG CCTTCGCCGC CCTCACCCAC
CCCGACCTGC GCGCCACCCT GGGCGTGGAC ACCGCGCACG CCTGGCCGGA CCGGCGCTCC
TGGCCCGCCC CCGAGGAGGC CGCCGAACAG GTCCTGGCCG AGGCCCCGGA CGACCCGGAG
GCCGCCGTGC GCGCGGTCCT GCCCGGCCGC GCCGCGGAGC TGCTCGACGC GTTCACCGCC
GCCGTCGGCT CCGGGTCCGC GGTCACCGAC GGCGACCTCA AGACCGTCTC CACACGCATC
TCCAACGCCC TGCGCGCCTT CCAGGACACC CTGGGCGGCG ACGCCGAGGG CTACCGGGTC
GACCACGAAC TCGGGGTCAG CGGCGTCATC ACGGTGTTCG TCAACGACGA GACCGGCCGC
AACCCCGTCT CCGCCTTCGC CCGCGTCATC GCCGAACGCG TCGAGGAGCA GGGAGCGCTG
CTGCGCGAGG AGGAGCGCGG GGTTCTGGAG GACGAACTGC TCACCGGGAT CGCCCAGCAG
ATCCACGAGC GGGTGCGGGT GGCCCGCGAC CTGGTCGTCA GCATGGACCG CGACACCCGT
TCGCGGCCCA TGTCCTCGGG CACCCGGATC GGCATCCGCT GGAGCCGCTC CGACCGCGTG
AGCGAGCACC AGGCCACCGC CGCCCGCCTG GTCCGGCGCG ACACCGACGA GCTGGGCGCC
TCGGGGCTGA CCCGGTTGCG CGAGGTCCTG CGGGAGATGA TCCGCGAGCA CCACGCCGCC
CACCCGCGCG CCACCTACAA GCAGGTCCTG TCGGCGGTGC TGGACTACCG CACCTGGTAC
CGGTTCGAGC TGCGCCTGGC CGTGCCGGGC CAGGAGGAGG TCAAGCTCAC CAGGAACAAG
CACGAGCAGA TGTCGGGCGG CGAGAAGTCC GCCGCGATCC ACCTGCCGCT GTTCGCCGCC
GCCAACGCCC TGTACACCTC GGCCGCGCCC ACCTGCCCCC GGATGGTGGC CCTGGACGAG
GCCTTCGCCG GGATCGACGA CCGCTACAAG CCCGAGCTCA TGGGGCTGAC GGTCACCTTC
GACCTGGACA TGTTCATGAC CGGGCACGAC CTGTGGGTGC ACTACGACAG CGTGCCCATG
GCCGCCCACT ACGACATGCA CCACGACAAG GGGGCGCACA CCGTCTCGGC GATGCTCATG
CTCTGGGACG GCACCCAGAC CATCGACGCC GACGCGGGGT TCTCCGGCAA CGAGGAGCTG
GCCGCGCAGC TGCTGGGCAT CACCCCCAGC CGGTTCGCCC CGCTGTCCTC GGCCGGAACC
CTGTTGGAGG ACGCCGACGC CTGA
 
Protein sequence
MSPRSDRFRP SRAGVINVWD YVDEEFVFAD GRLVLRGHNG SGKTKALEVL FPFILDGYTD 
ARRLDPFSGQ NRTMKSNLLY RGQDSEYGYV WMEFARTGPG EGTETVTLVI GLRAHRHRDG
VTPSFFVTDQ RLGVDFGLLA TDGRPLTERQ LKGVLGEDAF RSTAADYRRA VDARLFGLGE
RYVQLLDLLL ALRRPLLAKD LDPEKVSETL TSGLSPLDEE LLDQAARDFT NLAAVQRRFD
QASTAHAATT AFVGEYAAYL TAHARHRLAR VHTAAGQTAE QARAIAEARD TRERATLAHA
AATGRAEEHD ARIRRLAARR GGLEAHEAFR SHAALEIERA HSAETARALA EQRARLDDQA
GEVTALQREA DRVAADLEHG RARTGELAAE LAENAAQAGL DHDGEGPADT GDDLSAAARA
RATARRADVA AVRERLAELA RAETARGAAE RAAAQAEDRL GRGEAECARA ADDLAAARAG
AADALTAWAE HWAEGPAPVT DAACVAALSG ALESVGRPGT PTVSEVYGEH TDQQRLDAAA
HTRTLETDRD RLGAEIDRLT RERADIAAER DDAPPADALR TASREGSPGA PRGRWSASPT
RSANDEAAAV EGALHGAGLL TAWVHPDADA TRAALASGGA DAYLLPAEGA AAPEGPTLAD
VLVPERQDRV PEHVIARVLA SVRLVRDSEG SAGATDTVQS LGAADATGAG GAAAHTVGTG
ARFAQGVLVG VSPKAAPEFI GATNRAHRRR ERLAECDARI AELDERRARV AEQLDRAGEL
LKAFTRARAA LPETAPIDRA VRRVDQQSTL LASARAESEE RRRDLDAAVA EVDAHRHQVR
AVASERAMPA QPEAVDAVAR AVDDFLETAR RLHTARAEVD RHTVDLDGRK ETLDRLRARL
EEDRERHEER TREHERAAAE LAAKQEGIDA PVRELMAELE QVKEELHRAR EEHQGAQKEA
AAAHEAMIRA DEKLEGGQRA LTDSLSALFE QADAFAALTH PDLRATLGVD TAHAWPDRRS
WPAPEEAAEQ VLAEAPDDPE AAVRAVLPGR AAELLDAFTA AVGSGSAVTD GDLKTVSTRI
SNALRAFQDT LGGDAEGYRV DHELGVSGVI TVFVNDETGR NPVSAFARVI AERVEEQGAL
LREEERGVLE DELLTGIAQQ IHERVRVARD LVVSMDRDTR SRPMSSGTRI GIRWSRSDRV
SEHQATAARL VRRDTDELGA SGLTRLREVL REMIREHHAA HPRATYKQVL SAVLDYRTWY
RFELRLAVPG QEEVKLTRNK HEQMSGGEKS AAIHLPLFAA ANALYTSAAP TCPRMVALDE
AFAGIDDRYK PELMGLTVTF DLDMFMTGHD LWVHYDSVPM AAHYDMHHDK GAHTVSAMLM
LWDGTQTIDA DAGFSGNEEL AAQLLGITPS RFAPLSSAGT LLEDADA