Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2576 |
Symbol | |
ID | 9246427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3070263 |
End bp | 3072068 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003680501 |
Protein GI | 297561527 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0615694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGT CCGCGGCGTC GGGGCCGGTC GTGCGGGTGG AGGACCTGCG GGTGGTGTTC CCGACCATGG ACGGCGACGT CCGTGCGGTG GACGGTCTGT CCTTCGCCGT GCCCGTCGGG GGAGCGCTGG GCATCGTGGG CGAGTCGGGC TCGGGCAAGA GCGTGACCTC GCTGGCCCTC ATGGGCCTGC ACCGGGGCAG CCGGGCGCGG ATCACCGGGG AGGTCGAGGT GGCGGGCACC GACGTGGTCG GCGCCCCGGA CAAGAGGCTG CGGCGGATGC GCGGCAACGA TATCGCCATG GTCTTCCAGG ACCCGATGCA GTCGCTGCAC CCCCAGTTCA CCGTCGGCAA CCAGCTGGTG GAGGCGCTGC GCGTGCACCG GTCCGGGGTG TCGCGGTCCC TGGCCCGCGA GCGCGCGGTG GAGTCGCTGG AGCGGGTGGG CATCCCCGAG CCCGCCAAGC GGGTCAACTC CTACCCGCAC GAGTTCTCCG GCGGTATGCG CCAGCGCGTG CTGATCGCGA TGGGGCTGAT GTGCGAGCCC AAGGTGCTGC TGGCCGACGA GCCCACCACC GCCCTGGACG TGACGGTGCA GGCGCAGATC CTGGACCTGC TGGACGAGCT GCGCCGCGAC CTGGGCATGG CGCTGATCCT GGTCTCGCAC GACCTGGCGG TGGTGGCGGG TTCGGTGGAC GAGGTCGTGG TCATGCGCCA CGGCGTCGCG GTCGAGCGCG GCGACGTGCG CGAGGTGCTG TCCGCACCTC GGCACGCCTA CACCCGCGGG CTCCTGGACG CGGTGCCGCG CGTGGAGGTC TCCCGGGCCC ATCGGCGGGC GCGCGACCGG GCCGAGCGCG GCCAGCGGCA GGACCAGGAG AAGCGCCGCA GGTCGGGATC GGCCGCGGCG GGCGAGGCGG GGCGCAAGGG GCCGGACGAG GTCTTCCGGC CCTTCATCCC CGAGCCGAAG GAGGAGCGGG GCGAGCCCCT GCTGCGGGTG GAGGATCTGG CGCAGCGGTT CAGGGTGCGC GGCGGTATGT GGGGTCGGGC CACGGACTTC TGGGCGGTCA AGGGGGTCTC CTTCGACCTG CACCGCGGTG AGACGCTGGG GATCGTGGGG GAGTCGGGGT CGGGCAAGTC GACGCTGTCG CGGATGGTGA TGCGTCTGCT GGAGCCCACG CGGGGCCGGG TGGAGTTCGA GGGCCGCGAC ATCACCCACA TGCCCGAGCG GGCGCTGCGT CCGTTGCGCC GGGACGTGCA GATGGTCTTC CAGAACCCCT ACTCCTCGCT CAACCCGCGG GTGACCGTGG GGGACGCGAT CGGGACCGCG TTGCGGGTGC AGGGGGAGAA GGACGGCAAG AAGATCCGTC GTCAGGTGCA GGAGCTGTTG GAGCGGGTGG GGTTGGAGCC GGGGCACTAC AACCGGTTCC CGCACGCGTT CTCGGGTGGT CAGCGGCAGC GGATCGCGAT CGCGCGGGCG TTGATCCTCA AGCCGAAGCT GATCATCTGT GATGAGCCGG TGTCGGCGTT GGACGTGTCC ACGCAGGATC AGGTGTTGCG GTTGTTGTCG GAGTTGCAGG ACGACTTCGG GTTGACCTAC ATCTTCGTGG CCCATGATCT GGCGGTGGTG CGTCAGGTGA GTGACCGGGT CGCGGTGATG CGTGCGGGTG AGGTGGTGGA GATGGGTGAC AGCGACGCGG TGTACGAGAA CCCCACCAGC GACTACACCC GCCAACTGCT CAACGCGGCG CCCGTGCTGG ACCCCGACCA GGCCCGCGAA CTGCGCGCGG AGCGCACCCG CCAGCGGACC GGGTGA
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Protein sequence | MSESAASGPV VRVEDLRVVF PTMDGDVRAV DGLSFAVPVG GALGIVGESG SGKSVTSLAL MGLHRGSRAR ITGEVEVAGT DVVGAPDKRL RRMRGNDIAM VFQDPMQSLH PQFTVGNQLV EALRVHRSGV SRSLARERAV ESLERVGIPE PAKRVNSYPH EFSGGMRQRV LIAMGLMCEP KVLLADEPTT ALDVTVQAQI LDLLDELRRD LGMALILVSH DLAVVAGSVD EVVVMRHGVA VERGDVREVL SAPRHAYTRG LLDAVPRVEV SRAHRRARDR AERGQRQDQE KRRRSGSAAA GEAGRKGPDE VFRPFIPEPK EERGEPLLRV EDLAQRFRVR GGMWGRATDF WAVKGVSFDL HRGETLGIVG ESGSGKSTLS RMVMRLLEPT RGRVEFEGRD ITHMPERALR PLRRDVQMVF QNPYSSLNPR VTVGDAIGTA LRVQGEKDGK KIRRQVQELL ERVGLEPGHY NRFPHAFSGG QRQRIAIARA LILKPKLIIC DEPVSALDVS TQDQVLRLLS ELQDDFGLTY IFVAHDLAVV RQVSDRVAVM RAGEVVEMGD SDAVYENPTS DYTRQLLNAA PVLDPDQARE LRAERTRQRT G
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