Gene Ndas_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2576 
Symbol 
ID9246427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3070263 
End bp3072068 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003680501 
Protein GI297561527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0615694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGT CCGCGGCGTC GGGGCCGGTC GTGCGGGTGG AGGACCTGCG GGTGGTGTTC 
CCGACCATGG ACGGCGACGT CCGTGCGGTG GACGGTCTGT CCTTCGCCGT GCCCGTCGGG
GGAGCGCTGG GCATCGTGGG CGAGTCGGGC TCGGGCAAGA GCGTGACCTC GCTGGCCCTC
ATGGGCCTGC ACCGGGGCAG CCGGGCGCGG ATCACCGGGG AGGTCGAGGT GGCGGGCACC
GACGTGGTCG GCGCCCCGGA CAAGAGGCTG CGGCGGATGC GCGGCAACGA TATCGCCATG
GTCTTCCAGG ACCCGATGCA GTCGCTGCAC CCCCAGTTCA CCGTCGGCAA CCAGCTGGTG
GAGGCGCTGC GCGTGCACCG GTCCGGGGTG TCGCGGTCCC TGGCCCGCGA GCGCGCGGTG
GAGTCGCTGG AGCGGGTGGG CATCCCCGAG CCCGCCAAGC GGGTCAACTC CTACCCGCAC
GAGTTCTCCG GCGGTATGCG CCAGCGCGTG CTGATCGCGA TGGGGCTGAT GTGCGAGCCC
AAGGTGCTGC TGGCCGACGA GCCCACCACC GCCCTGGACG TGACGGTGCA GGCGCAGATC
CTGGACCTGC TGGACGAGCT GCGCCGCGAC CTGGGCATGG CGCTGATCCT GGTCTCGCAC
GACCTGGCGG TGGTGGCGGG TTCGGTGGAC GAGGTCGTGG TCATGCGCCA CGGCGTCGCG
GTCGAGCGCG GCGACGTGCG CGAGGTGCTG TCCGCACCTC GGCACGCCTA CACCCGCGGG
CTCCTGGACG CGGTGCCGCG CGTGGAGGTC TCCCGGGCCC ATCGGCGGGC GCGCGACCGG
GCCGAGCGCG GCCAGCGGCA GGACCAGGAG AAGCGCCGCA GGTCGGGATC GGCCGCGGCG
GGCGAGGCGG GGCGCAAGGG GCCGGACGAG GTCTTCCGGC CCTTCATCCC CGAGCCGAAG
GAGGAGCGGG GCGAGCCCCT GCTGCGGGTG GAGGATCTGG CGCAGCGGTT CAGGGTGCGC
GGCGGTATGT GGGGTCGGGC CACGGACTTC TGGGCGGTCA AGGGGGTCTC CTTCGACCTG
CACCGCGGTG AGACGCTGGG GATCGTGGGG GAGTCGGGGT CGGGCAAGTC GACGCTGTCG
CGGATGGTGA TGCGTCTGCT GGAGCCCACG CGGGGCCGGG TGGAGTTCGA GGGCCGCGAC
ATCACCCACA TGCCCGAGCG GGCGCTGCGT CCGTTGCGCC GGGACGTGCA GATGGTCTTC
CAGAACCCCT ACTCCTCGCT CAACCCGCGG GTGACCGTGG GGGACGCGAT CGGGACCGCG
TTGCGGGTGC AGGGGGAGAA GGACGGCAAG AAGATCCGTC GTCAGGTGCA GGAGCTGTTG
GAGCGGGTGG GGTTGGAGCC GGGGCACTAC AACCGGTTCC CGCACGCGTT CTCGGGTGGT
CAGCGGCAGC GGATCGCGAT CGCGCGGGCG TTGATCCTCA AGCCGAAGCT GATCATCTGT
GATGAGCCGG TGTCGGCGTT GGACGTGTCC ACGCAGGATC AGGTGTTGCG GTTGTTGTCG
GAGTTGCAGG ACGACTTCGG GTTGACCTAC ATCTTCGTGG CCCATGATCT GGCGGTGGTG
CGTCAGGTGA GTGACCGGGT CGCGGTGATG CGTGCGGGTG AGGTGGTGGA GATGGGTGAC
AGCGACGCGG TGTACGAGAA CCCCACCAGC GACTACACCC GCCAACTGCT CAACGCGGCG
CCCGTGCTGG ACCCCGACCA GGCCCGCGAA CTGCGCGCGG AGCGCACCCG CCAGCGGACC
GGGTGA
 
Protein sequence
MSESAASGPV VRVEDLRVVF PTMDGDVRAV DGLSFAVPVG GALGIVGESG SGKSVTSLAL 
MGLHRGSRAR ITGEVEVAGT DVVGAPDKRL RRMRGNDIAM VFQDPMQSLH PQFTVGNQLV
EALRVHRSGV SRSLARERAV ESLERVGIPE PAKRVNSYPH EFSGGMRQRV LIAMGLMCEP
KVLLADEPTT ALDVTVQAQI LDLLDELRRD LGMALILVSH DLAVVAGSVD EVVVMRHGVA
VERGDVREVL SAPRHAYTRG LLDAVPRVEV SRAHRRARDR AERGQRQDQE KRRRSGSAAA
GEAGRKGPDE VFRPFIPEPK EERGEPLLRV EDLAQRFRVR GGMWGRATDF WAVKGVSFDL
HRGETLGIVG ESGSGKSTLS RMVMRLLEPT RGRVEFEGRD ITHMPERALR PLRRDVQMVF
QNPYSSLNPR VTVGDAIGTA LRVQGEKDGK KIRRQVQELL ERVGLEPGHY NRFPHAFSGG
QRQRIAIARA LILKPKLIIC DEPVSALDVS TQDQVLRLLS ELQDDFGLTY IFVAHDLAVV
RQVSDRVAVM RAGEVVEMGD SDAVYENPTS DYTRQLLNAA PVLDPDQARE LRAERTRQRT
G