| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2405 |
|---|
| Symbol | |
|---|
| ID | 9246255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2854873 |
|---|
| End bp | 2856771 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_003680332 |
|---|
| Protein GI | 297561358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0998709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACG AGCCCCGCTC CGCGCCCCCA TCCGACACCG CGCCCCGCGC CCCGAGGGCC
GCACGCCCCC GGGCGGGCCC CGTGGCCCCG ACCGTCCTGG TCTGCGCCGC CGCAACCCTG
GTCGGTGTGC TCGCCGCGGC CGCCTCGACG TCGGTTCCGG GCGCGGCGGG GGACCCCGAC
TCCCTCCCCG CCCTGGCCGT GCGGGCCGCG CTGTGCACGG CGCTGGTGCC GCCGCTGCTG
TGGGCCGCCC GCCGCTTCCT GGACCGCGCG CCGACCCCCG CGTTCGGCCT CGCGCCCCGG
GGATGGCCCG TCCCGCTGGC CGCAGCCCTC ACCGTCCTGC TCGCCTCGGC CGCGCTCCTG
GGCGCGGCGC GGGCCCTGGG CGCGGCCACC CCGGACACCG GCGCGGTCGG GGGCGCCGCC
TCGGCCCTGG CCGTGACCCT GCCCCTGCTC CTGGCGGCCC AGATCCTGCC CGAGGAACTG
GTCTTCCGCG GCTACGCGCA GCACCACCTG GGGCTGCGGT ACCCCCCGTG GGCGGCTCTC
CTCGGCCAGG CCGCCCTGTA CACGCTCTTC GCCGCCGCGG TCACCGGCTC GGCGGCGCTC
TCCGGCGAGG TGTTCCTCCT GGGCCTGTTC CTCGGGGCCC TGAGAACGAC CACCGGGGAG
GTGTGGACGC CGCTGGCCGC GCGAACGGCC CTGACCGCCG TCGGCGTGCT CTCCGATGAA
CTCGGCCTGC GCCTGTCCTC CGCTCCGGAA CCCTGGCAGG CGGTGCTCTC CCTCGGCCCG
GGCCTGGCCG CCTTCTGGGT CGTGTACGCG TTGCGCGGCC GCGGCCGGGC GGGCGCCCCC
TTCCCCGACG CGGGCGGGCC GCGCCGCCCC CTGGCGCAGA GGGGGATCCT GTACGACGTC
GGCTCCAGCT ACCTGCCCGG TCAGAACTCC CGGCCGCGGT GGCGCCCGGA TGTGGTGGAC
CGGGAGATGC GGGTGATCCG CGAGGACCTG CACTGCACGG CGGTCACCGT CTTCGGCGAG
GACCTCGGGC GGCTGGAGGA GGCGGCCCGC CTGGCGCTGG GCCGGGGGCT GTACGTGTGG
GTCCAGCCCC GCCTGGTCGA CGCCGCGCCG GGCGAGCTGA CGGCCAACCT GGGCCGGGCC
GCCGAGGCCG CCGAACGGCT GCGCCGCGAC CACCCCGAAC GGGTGGGCCT CAACGTGGGC
TGCGAGATCA GCCTGTTCGC CGCCGGGGTG CTGCCCGGCC GCGACCTGGA CCGGCGCACG
CGCGCGCTGG GGCTGCTCTT CCCCCTGCTG CCGTGGTTCG ACCGCAGGCT CAACCGGCTG
CTGCGCGAGC TGGCGGACAC CGCGCGCGCG AGGTTCCACG GGCCGCTCAC CTACGGTTCC
GGTGCATGGG AGACCGTGGA CTGGACGCCG TTCGACGTGG TCGGCGTGGA CTACTACCTG
GACGAGCTCA CCCGCCGCTC CTACCGGCAG GGGCTGCGTC GGCTGCGCGC CCACGGCAAA
CCGCTGGTCG TCACCGAGTT CGGCTGCTGT TCCTACGAGG GCGCCCGGGA CAGGGGCGGC
TCGGGCTCGG ACATCCTGGA CTGGAGCGAC CTGGGGGACC GCAGGGTCAG GGACGGGTAC
GTGCGCGACG AGCGGGTGCA GGCAGACCTC ATCAGTGACC TGCTGGACGT GTTCGAGACC
GAGGAGGTGC ACGGGGCGTT CGTGTGCATG TTCATCGAGG GCGACTGCCG CTACTCCCCC
GATCCCACCC GCGACCAGGA CATGGCCAGT TTCGGGATCG TGCGCCCGCC ACCGCTGGAG
TCGGGGCTGT CCCCCGACGA CGGCCACTGG GAGCCCAAAC TGGCCTTCCA CACCCTGGCC
GCCCGCTACG CCGAGGAGGC GCCCGACCGC ACGGGCTGA
|
|---|
| Protein sequence | MPDEPRSAPP SDTAPRAPRA ARPRAGPVAP TVLVCAAATL VGVLAAAAST SVPGAAGDPD
SLPALAVRAA LCTALVPPLL WAARRFLDRA PTPAFGLAPR GWPVPLAAAL TVLLASAALL
GAARALGAAT PDTGAVGGAA SALAVTLPLL LAAQILPEEL VFRGYAQHHL GLRYPPWAAL
LGQAALYTLF AAAVTGSAAL SGEVFLLGLF LGALRTTTGE VWTPLAARTA LTAVGVLSDE
LGLRLSSAPE PWQAVLSLGP GLAAFWVVYA LRGRGRAGAP FPDAGGPRRP LAQRGILYDV
GSSYLPGQNS RPRWRPDVVD REMRVIREDL HCTAVTVFGE DLGRLEEAAR LALGRGLYVW
VQPRLVDAAP GELTANLGRA AEAAERLRRD HPERVGLNVG CEISLFAAGV LPGRDLDRRT
RALGLLFPLL PWFDRRLNRL LRELADTARA RFHGPLTYGS GAWETVDWTP FDVVGVDYYL
DELTRRSYRQ GLRRLRAHGK PLVVTEFGCC SYEGARDRGG SGSDILDWSD LGDRRVRDGY
VRDERVQADL ISDLLDVFET EEVHGAFVCM FIEGDCRYSP DPTRDQDMAS FGIVRPPPLE
SGLSPDDGHW EPKLAFHTLA ARYAEEAPDR TG
|
|---|
| |