Gene Ndas_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2305 
Symbol 
ID9246155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2754339 
End bp2755388 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003680233 
Protein GI297561259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCACCA GGTCCCCCAA CGCACGCCGA GGCGTGGGTA TCACCGAGGT CGCCCGGCGC 
GCCGGGGTCT CGCCCGGAAC CGTGTCCAAC GTGCTCAACC GCCCCGAGCG CGTCGCCGAG
GCCACCCGCC TGCGGGTCGA GGCGGCCATC ACCGAGCTCG ACTACGTGCG CAACTCCTCC
GGCAGCAGCC TGCGCTCGGG CCGCAGCGAG TCCGTGGGGC TGCTCGTGCT GGACGTGACC
AACCCGTTCT TCACCGAGGT CGCCCGGGGC GTGGAGGACG AGGCGGCCGG ATCCGGGCTC
GCCGTGGTGC TGCTCAACTC CGCCGAGAAG CGCGAGCGCC AGCAGCGCAA CGTGCGCCTG
CTGGCCGAGC AGCGCGCGGC CGGGGCCGTG GTGATGCCGG TGGACGACGA CCTGTCGGAC
CTTCTGTGGC TGAGCCGCCA GGGGACCTTC TGGGTGGCCC TGGACCGGGG CGACGTCGCC
GAGGACGTGG GGTGCAGCGT CAGCGTGGAC AACCACGCGG GCGGGATGGC GGCCGGGAGG
CACCTCATCG GGCTGGGGCA CGAGACGGTG ACCTTCCTGA CCGGGCCGTT CGCCATCGAA
CAGGTCAGGC GCAGGCACGA GGGGCTGCGC GACGCCTTCA CCGAGGCCGG GCTGGACCCG
GACTCCTGCG TGCGGGTGGT CGAGCAGCCG CTGCTCAACC CCGAGCAGGG CGAGCGGGCG
GTGGACGCGA TCCTGGGCGG GGGGCCGCGG CAGCGGCCGC GGGCGGTGTT CTGCGCCAAC
GACCAGCTCG CGCTCGGCGT GATGAAGGGC CTGGGCCAGC GGGGCCTGCG GGTGCCCGAG
GACATGTCGG TGGTGGGCTA CGACAACGTG GACTTCGCCG ACCTGGTGCA CCCGGGGCTG
ACCACGGTGG CCCAGCCCAA GTACGAACTG GGCCGGGCGG CGATGCGCCT GCTGGAGTCG
GAGCTGAACC ACGGCGAGCA CGTCCACGAG CGGGTGCTGT TCACGCCGGA GCTGGTGGTG
CGGGGTTCGA CGGCGGTGTA CCGGGACTGA
 
Protein sequence
MSTRSPNARR GVGITEVARR AGVSPGTVSN VLNRPERVAE ATRLRVEAAI TELDYVRNSS 
GSSLRSGRSE SVGLLVLDVT NPFFTEVARG VEDEAAGSGL AVVLLNSAEK RERQQRNVRL
LAEQRAAGAV VMPVDDDLSD LLWLSRQGTF WVALDRGDVA EDVGCSVSVD NHAGGMAAGR
HLIGLGHETV TFLTGPFAIE QVRRRHEGLR DAFTEAGLDP DSCVRVVEQP LLNPEQGERA
VDAILGGGPR QRPRAVFCAN DQLALGVMKG LGQRGLRVPE DMSVVGYDNV DFADLVHPGL
TTVAQPKYEL GRAAMRLLES ELNHGEHVHE RVLFTPELVV RGSTAVYRD