Gene Ndas_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2279 
Symbol 
ID9246129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2728452 
End bp2731553 
Gene Length3102 bp 
Protein Length1033 aa 
Translation table11 
GC content77% 
IMG OID 
ProductSNF2-related protein 
Protein accessionYP_003680207 
Protein GI297561233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.613804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTTC TGCACGGCGT GTGGGCCGGA GACGCGCTGG CGGTGTGGGC CGAGTCCGAC 
CGGGCCGGGT CCTCCCCCTC CACCCCTCCT CCGGCCGGGG GCGCGCACGG CCGTGCGCGC
CCGCACCCGT TCGCCCTGGG GGCCCGCGAC CTGAGCGCAC TCCTGGTGGA CGCGGGGATC
GGGGCGGACT CCGCCGCGCA CGGCACCCTG GACCTGTCCC TGCCCGGGGA CACCTCCGCC
CCCTTCCCCT CCACCCGCGC CCCCGGCACC GCACCGGCCG CCTTCCACCC CTGGCGGGTG
CCCGCCCTGC GGCTGGACGC CGCCTCCGCC GAGGCCCTCC TGGCCGCACC CGCACGCGAC
ATCCCCGGCA CCGCCTCCGG TCCCTCGCTG GCCCATCTGC GCGCGGTCCG CGACTTCGCC
GAACTCCTGG TCACCTCCGG GTGCGTGCTG CCCGACCTGG TGGGCGACCC CGCCCGGGCC
CGCTGGCGGC CCGCGCCGCT GGACTGGGCG GAGGAGCACC TGGCCGCGCT CACCGGCGCC
CTGCCGCCCT CCGCCCGCGC CCACCTGCCC GGGGAGCCGC CCGACGCGAT CGCCCGGGCC
TGCGTGCTCG CCCCCCTGGA ACTGCTCACC GACGCGGCGG CCCGCCGCCT GGTCCGGCCC
CGCCGCGCGC ACCGGGCCCG GACCGACCCG GCAGACCAGG GCCGGACCGA CCCAGTGGAC
CAGTCCCGGA CCGACCCGGC AGGCCAGGGC CGGACCAGCC CGGAACAGAC CTCCGACGAC
GGCGCCGCCC CCGGCCAGCG GCTGGCCGCC GCGCTCACCG GCGCCCCGGA CGGGATCGGC
GCCGACACCG CCGCCCGGCT GCGCGGACCC CTGCGCGAGT GGCGCTCGCG GGTGCGCGGC
GCGGGGCGGG CGGCGCTGCT GTTCCTGCTG CGCGAACCCG ACCGCGCGGG GCCGTGGGCA
CTGGAGTTCT GGGTGCGCTC GGTCAGCGAC CCCGGCCTGC GCCTGCCCCT GGAACAGGTG
TGGCAGGGCG AGGGCGCCGC CTGGCTGCCC GCCGACGTGG ACGCCACCGC CCTGGCCGAC
CTGCGCCGGG CCGCGCGCCA CCATCCGCCG CTGCGCCGCG CGCTGCGCGA CCTGGCCCCG
GCCCGGCTGC TGATGAGCAC GGAGGACGCC GAGCGGTTCG TGGCCGAGGG CGCCGCCCGG
CTGAGCGGCG CCGGGTTCGG GGTGGTCCTG CCCGAGTGGC GCGGCAGGCC CGCCCTGGGC
CTGCGGGTGG CGGTCGAGGA GGCGCCCCGC CGACGCGGGG GCGGCGGGGT GGGCCCCTCC
GAGCTGGTCA ACGTGTCCTT CGAGGCCCTG CTCCAGGGGC GCGACGGCGA GGAGTCCGTA
CCGCTCGGCG AGGACGAGCT GGCCGAACTC GCCGAGCTGG CCCGCCTCAA GCGTTCGCTG
GTGCGCGTGC GCGGCCGGTG GCTGGAGGTG GACCCCGAGC GGCTCAGCGC CACCCTGGAC
CTGGTCAAGC GGCGCGGCGG CCACTGGATG CGCACCGACG AGGCGCTGCG CACGGCCATC
GGGGTGGAGG GCACCACTCC CCTGCCGGTG GCCGACGCGG TCGCCTCCGG TCCGCTGGGC
GCGCTGCTGG ACGGGGGCGC CAAGGCCGAG CCTCGCCCGA TGGGCACACC GTCCGGTTTC
CGGGGTTCGC TGCGCCCCTA CCAGGACCGG GGCGCGTCGT GGCTGCGCTT CCTGGGCGAG
TTGGGCCTGG GCGCGGTCCT GGCCGACGAC ATGGGCCTGG GCAAGACCGT GCAGCTGCTG
GCCCTGCTCA CCGACGAGCG GCTGCGCGAA CCCGCTCCGG GGCCGACCCT GCTGGTGTGC
CCGGTCTCGC TCGTGGGCAA CTGGCGTCGC GAGGCCGAGC GGTTCGCGCC CTCGCTGCGG
GTGCACGTCC AGCACGGCCC GGACCGGCCC TCGGGCAACG CCCTGGCCCG CCTGGTGGGC
TCGTGCGACC TGGTCGTCAC CACCTACGGC GTGGTCACCC GCGACAGCGA GGAGCTGGCG
GGCATGCCCT GGCACCGGGT GGTGTGCGAC GAGGCTCAGG CGCTCAAGAA CCACGGCACC
CGGCAGGCCC GCGCGGTGCG GTCGCTGCCC GCGGCCACGC GGATCGCGCT CACCGGCACC
CCGGTGGAGA ACAACCTGGG CGAGCTGTGG TCGGTGATGG AGTTCGCCAA CCCGGGGCTG
CTGGGCACGG CGGCGGCCTT CGAGCGGGCG GTCGAGGGCG AGGAGGGGCC CGACACCGCG
CTGGTGCGCC GCATGACCGG GCCGTTCGTG CTGCGCCGCC TCAAGACCGA CCGGTCGATC
ATCGCCGACC TGCCCGAGAA GCTGGAGATG CGCACCTGGT GCACGCTCAC CCCGGAACAG
GCCTCGCTGT ACAAGGCGGT GGTGGACGAG ATGGGCGAGC GGCTGGCCGA GGCGACAGAG
AAGGAGCGCA AGGGGCTGGT GCTGGCGACG ATGTCGCGGC TCAAGCAGAT CTGCAACCAC
CCGGCGCAGT TCCTGGGGGA CGGCTCGGCG CTGTCGGGGC GCTCGGGCAA GCTGGAGCGG
GTGGAGGCGA TCCTGGCCTC GGCCGCGGCC GAGGGCGACA AGGCCCTGTG CTTCACCCAG
TACGCGCGCT TCGGTGAGCG CCTGGCCCCC TACCTGCGTT CGCGTCTGGG GGTGCCGGTG
CTGTGGCTGC ACGGGGGCAC TCCGCGGGCG GAGCGGGAGG AGATGACGCA GCGCTTCCAG
GAGATGGAGG GCCCGGCGGT GTTCCTGCTC TCGCTCAAGG CCGCCGGGAC GGGGCTGAAC
CTGACCGCGG CCAACCACGT GGTGCACGTG GACCGCTGGT GGAACCCGGC GGTGGAGAAC
CAGGCCACCG ACCGGGCGTT CCGGATCGGC CAGCGGCGGG ACGTGCAGGT GCGCAAGATG
GTGTGCGTGG GCACGGTCGA GGAGCGGGTG GACGAGATGA TCGAGCGCAA GAGCGCGCTG
GCCGACGGCG CCGTGGCCAC CGGTGAGGCG TGGCTGACCG GGTTGTCCGT CCAGGACCTG
CGCGAGGTCG TGCGGTTGTC CCCGGAGGCG GTGGCCGAGT GA
 
Protein sequence
MRVLHGVWAG DALAVWAESD RAGSSPSTPP PAGGAHGRAR PHPFALGARD LSALLVDAGI 
GADSAAHGTL DLSLPGDTSA PFPSTRAPGT APAAFHPWRV PALRLDAASA EALLAAPARD
IPGTASGPSL AHLRAVRDFA ELLVTSGCVL PDLVGDPARA RWRPAPLDWA EEHLAALTGA
LPPSARAHLP GEPPDAIARA CVLAPLELLT DAAARRLVRP RRAHRARTDP ADQGRTDPVD
QSRTDPAGQG RTSPEQTSDD GAAPGQRLAA ALTGAPDGIG ADTAARLRGP LREWRSRVRG
AGRAALLFLL REPDRAGPWA LEFWVRSVSD PGLRLPLEQV WQGEGAAWLP ADVDATALAD
LRRAARHHPP LRRALRDLAP ARLLMSTEDA ERFVAEGAAR LSGAGFGVVL PEWRGRPALG
LRVAVEEAPR RRGGGGVGPS ELVNVSFEAL LQGRDGEESV PLGEDELAEL AELARLKRSL
VRVRGRWLEV DPERLSATLD LVKRRGGHWM RTDEALRTAI GVEGTTPLPV ADAVASGPLG
ALLDGGAKAE PRPMGTPSGF RGSLRPYQDR GASWLRFLGE LGLGAVLADD MGLGKTVQLL
ALLTDERLRE PAPGPTLLVC PVSLVGNWRR EAERFAPSLR VHVQHGPDRP SGNALARLVG
SCDLVVTTYG VVTRDSEELA GMPWHRVVCD EAQALKNHGT RQARAVRSLP AATRIALTGT
PVENNLGELW SVMEFANPGL LGTAAAFERA VEGEEGPDTA LVRRMTGPFV LRRLKTDRSI
IADLPEKLEM RTWCTLTPEQ ASLYKAVVDE MGERLAEATE KERKGLVLAT MSRLKQICNH
PAQFLGDGSA LSGRSGKLER VEAILASAAA EGDKALCFTQ YARFGERLAP YLRSRLGVPV
LWLHGGTPRA EREEMTQRFQ EMEGPAVFLL SLKAAGTGLN LTAANHVVHV DRWWNPAVEN
QATDRAFRIG QRRDVQVRKM VCVGTVEERV DEMIERKSAL ADGAVATGEA WLTGLSVQDL
REVVRLSPEA VAE