Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2216 |
Symbol | |
ID | 9246066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2646157 |
End bp | 2648019 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | serine/threonine protein kinase |
Protein accession | YP_003680144 |
Protein GI | 297561170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000015062 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000142315 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGTCCCTTA GGCTCGATCC CAGTGACCCG GAACGTATCG GCCGGTACCG GCTGATCGGC CGTTTGGGCT CTGGCGGCAT GGGCCAGGTG TTCTTCGGCC GCTCGGCCGG GGGGCGTGCG GTGGCGGTCA AGCGCATTCA TCCGCACATG GCCGCCGACG CCTCCTTCCG GGAGCGTTTC GCCCGTGAGG TCAACGCCGC CCGTCAGGTC AGCGGTGCGT TCACCGCGCC GGTGATCGAC GCGGGTCCCG ATGACGAGGT GCCCTGGCTG GTCACCTCGT ACGTGCCGTC GTTGCCGTTG GACACGGCGG TGCACGACCA CGGGCCGTTG CCGGAGGCGA GTGTGCGGGT GCTCGCGGCG GGTCTGGCCG AGGCGTTGGC CGACATCCAC AGGGTGGGGT TGATCCACCG TGACCTCAAG CCCGGCAACG TGCTGTTGGC CGAGGACGGG CCGCGGGTGA TCGATTTCGG TATCGCCCGT GCCACCGACG GTACGGCGGC CACGCAGTCG GTGATCGGTA CGCCGGGGTT CATGAGTCCG GAGCAGGTGC AGGGGGAGGC GCTCACCCCG GCCAGTGACC TGTTCGCCTA CGGTGCGGTG CTGGCCTACG CGGCGGCGGG GACGGGTCCC TTCGGTGAGG GCAGTATGCC CACCATGGTC ATGCGCATCA TCAGTCGTGA GCCGGATCTG TCGGGTGTGC CCGAGTCGTT GCGTCATCTG GTGGCGGCGT GTTTGTCCAA GGATCCGCAG GGTCGTCCGG GGCCGGGGGA GATCCTGGAC TACCTGGGTG ATGTGGCCAC GGGGCCGACC TGGTTGCCCG CGGCGGTGAT GCGGGGGGTC CAGGAGCAGG TGGCCAAGGT CAACGGGGCG TTGGCGGCCG CTGCTGGGGA TGGGCGTGTC ACCGGTCAGC ACCAGCGCAC GGAGGTGTTG GGGCAGGGTG GTGCTGCTGC TGTGGGTGGT GCGGCGGGAG CTGCGGCTGG TGCGGGTGTG TTCGGTGATG AGGCGGCCAC CCGTGTCACG CCGCAGGCGC CGGGGCACGA GGGCGGTGCG ACCTCGGTGT GGGGTGAGCA GCAGGGGTAT GGGGCCACGG CCCGTTTCCC GTCGGGGCAG CAGGTTCCGC CGACCGCCCA GTACGGTCAG GGCGCCACGG CCTATGGCCA GGGGGCGGCT CACGGTCAGG GCGGTGCTTC CCACGGGCGG GAGGAGGCCG CGGGTCACCG GCAGCCGGAC CGGCCCAGCC AGGAGGACGC CTACGCCGAC CTGTACGGCG ATCGGCGTGA TCCGGCCGCG GACGCGCGCC GCCAGCAGCA GGAGCAGTTG CGTCAGCAGG AGGAGCAGCG CCAGCGGCGG ATGCAGGAGC AGCAGCGCCA CCAGGAGGAG CAGCGCAGGC GGGCGGAGGA GCAGCAGCGT CAGCAGCAGG AGCAGCGGCT GGAGCACCGG CGCCGTCAGG AGGCGGAGCG GGCCCACCGT GAGCGGGTGC GGGCCGAGCA GGAGGCCGCG CGCCGCGCCC AGAGCCAGGC GCGCCATGCC GACCAGCCGG GCCTGTGGGG TTTCGTCAAG CTGTTGCCGC TGCTGATCAT TCCGCTGATC CAGGTGCCGT TGGGGTACGG GGCGGCGTTG GCGTGGGCGT GGTTCACCAC CGAGACCGAG GTGTGGACGG GGGCGCCGTA CGCGTTCGAG CCCTTCCGGT GGGAGTCCTT CTGGCACGCG ATGATGCTGG GGTACTTCAT CTTGAACAAC CTGGTGTCGT TGGAGTACCT GGTCAGGTCG TTGCGTACGT CGTTCGTCAC GGGTGCGGTG TTGGCGTTGG GTGCGATCGC GGCGACCAAC GGCCTGCTGT ACAGCTTCGG TTTCTGGGGC TGA
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Protein sequence | MSLRLDPSDP ERIGRYRLIG RLGSGGMGQV FFGRSAGGRA VAVKRIHPHM AADASFRERF AREVNAARQV SGAFTAPVID AGPDDEVPWL VTSYVPSLPL DTAVHDHGPL PEASVRVLAA GLAEALADIH RVGLIHRDLK PGNVLLAEDG PRVIDFGIAR ATDGTAATQS VIGTPGFMSP EQVQGEALTP ASDLFAYGAV LAYAAAGTGP FGEGSMPTMV MRIISREPDL SGVPESLRHL VAACLSKDPQ GRPGPGEILD YLGDVATGPT WLPAAVMRGV QEQVAKVNGA LAAAAGDGRV TGQHQRTEVL GQGGAAAVGG AAGAAAGAGV FGDEAATRVT PQAPGHEGGA TSVWGEQQGY GATARFPSGQ QVPPTAQYGQ GATAYGQGAA HGQGGASHGR EEAAGHRQPD RPSQEDAYAD LYGDRRDPAA DARRQQQEQL RQQEEQRQRR MQEQQRHQEE QRRRAEEQQR QQQEQRLEHR RRQEAERAHR ERVRAEQEAA RRAQSQARHA DQPGLWGFVK LLPLLIIPLI QVPLGYGAAL AWAWFTTETE VWTGAPYAFE PFRWESFWHA MMLGYFILNN LVSLEYLVRS LRTSFVTGAV LALGAIAATN GLLYSFGFWG
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