Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2105 |
Symbol | |
ID | 9245955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2525067 |
End bp | 2525675 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003680036 |
Protein GI | 297561062 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.143952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCCAC CCGCCGGGCA GCGCCCCTAC CACCACGGCA ACCTCCGCAG CGCGATCCTC GACGCCGCCG CGCGCCAGCT GCGCGAGCAC GGAGCGGACC AGCTCTCCCT GCGGGACCTG GCCAGGGAGG TCGGCGTGAG CCACGCCGCG CCGCGGAGGC ACTTCGCCGA CCGGCAGGCG CTCCTCGACG CCCTGGCCGA GGCGGGGTTC GTCCGGTTGG GCGAGGCGCT GCGCACCGCG CTGGCGGAGG CCGGGGACGC GTTCGACGTA CGGGTGCACG GGGCCGTGCT GGCCTTTGCC CGTTTCGCCA CCGAGAACGC CGCGCTGCTC GAACTGATGA ACTCCGGCAA ACACCGGCCG GGAGCCACAC GGCTCGTCGA GGCGGCCGAG GCCGCCTTCG GGCAGGTCAG CGAGCTGATC GAGGAGGGCC AGGAGCGCGG CGCGCTCGAA CACGGCGACC CCGAGCGCAT CGGGATCATC CTGTACGCGA CCGTGCAGGG CATCGCGACG ATGGTCAACG GCGGCATGAT CGACGCGGAC AGGCTCGACG GGCTGGTCGA GACCGCGGTC GAGCAGTTCC TGCGGGGCGC CCGCCCCCAC GGCCGGTAA
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Protein sequence | MTPPAGQRPY HHGNLRSAIL DAAARQLREH GADQLSLRDL AREVGVSHAA PRRHFADRQA LLDALAEAGF VRLGEALRTA LAEAGDAFDV RVHGAVLAFA RFATENAALL ELMNSGKHRP GATRLVEAAE AAFGQVSELI EEGQERGALE HGDPERIGII LYATVQGIAT MVNGGMIDAD RLDGLVETAV EQFLRGARPH GR
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