Gene Ndas_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2105 
Symbol 
ID9245955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2525067 
End bp2525675 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003680036 
Protein GI297561062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCAC CCGCCGGGCA GCGCCCCTAC CACCACGGCA ACCTCCGCAG CGCGATCCTC 
GACGCCGCCG CGCGCCAGCT GCGCGAGCAC GGAGCGGACC AGCTCTCCCT GCGGGACCTG
GCCAGGGAGG TCGGCGTGAG CCACGCCGCG CCGCGGAGGC ACTTCGCCGA CCGGCAGGCG
CTCCTCGACG CCCTGGCCGA GGCGGGGTTC GTCCGGTTGG GCGAGGCGCT GCGCACCGCG
CTGGCGGAGG CCGGGGACGC GTTCGACGTA CGGGTGCACG GGGCCGTGCT GGCCTTTGCC
CGTTTCGCCA CCGAGAACGC CGCGCTGCTC GAACTGATGA ACTCCGGCAA ACACCGGCCG
GGAGCCACAC GGCTCGTCGA GGCGGCCGAG GCCGCCTTCG GGCAGGTCAG CGAGCTGATC
GAGGAGGGCC AGGAGCGCGG CGCGCTCGAA CACGGCGACC CCGAGCGCAT CGGGATCATC
CTGTACGCGA CCGTGCAGGG CATCGCGACG ATGGTCAACG GCGGCATGAT CGACGCGGAC
AGGCTCGACG GGCTGGTCGA GACCGCGGTC GAGCAGTTCC TGCGGGGCGC CCGCCCCCAC
GGCCGGTAA
 
Protein sequence
MTPPAGQRPY HHGNLRSAIL DAAARQLREH GADQLSLRDL AREVGVSHAA PRRHFADRQA 
LLDALAEAGF VRLGEALRTA LAEAGDAFDV RVHGAVLAFA RFATENAALL ELMNSGKHRP
GATRLVEAAE AAFGQVSELI EEGQERGALE HGDPERIGII LYATVQGIAT MVNGGMIDAD
RLDGLVETAV EQFLRGARPH GR