Gene Ndas_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2025 
Symbol 
ID9245875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2445576 
End bp2446760 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content79% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003679957 
Protein GI297560983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.720757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGCC CGATCGACGA CGAGACCCGG CCCGCGCGCC GCAGCTCGCC GCGGGCCCTG 
GCCGCCGTGG TCGTCCTGGT CTGCCTCCAG GTCGCGGCGG CGGTCTGGGC CCGCTGGGAG
GGCCACACGC AGCCCTGGAC GCGGGAGCTG GACCTGGCCG TCGGCTTCGT GGTCTGCGTG
CTCTCCCCCG TCCTGCTGCG GTGGCCGGTC ACCGGCGCGC TGGGCGCGGC CGTCCTGGCC
GTCCTCTCCC CCGCCGCCAC CCCTGCGGCG GCGCTGGGCG TGCTCCAGGT CGCCCACCGG
CGCCCCCTGC CGCTGGCCCT CGCGGTCGCC GCGGCCGCGG TCGCCGCGCA CGCGGTCCAG
GGGCTGTTCC AGCCCAGCGC CCAGATCTCC TACGCCTGGT GGCTGGCCCT GATCACCATC
GCCACCGGTG CTCTGGTGGG CTGGGGCGCC CTGGCCCGGG CCCGCCGCGC GCTGGTGATG
TCGCTGCGCG AGCGCGCCCG CCGGGCCGAG GCCGAACAGG GCCGCCGGGT GGCCGAGGCG
CGGATGCTGG AGCGCACCCG CATCGCCCGC GAGATGCACG ACGTGCTCGC CCACCGGCTG
TCCCTGCTGG CCACCTACGC CGGGGCGCTG GAGTACCGGC CCGACGCCCC GCCCGAGCAG
CTCGCCCGCG CCGCCGGGGT GGTGCGCACC GGGGTCCACC AGGCCCTGGA GGAGCTGCGC
GAGGTGATCG GCGTGCTGCG CGAGGAGGAA CCCGAGGCGG GCGGGCGCCC ACAGCCGGTC
CTGTCCGACG TCCCCCGTCT GGTGGAGGAG GCGCGCGGGG CCGGGGAGCG CGTGGAGCTG
CGCGACGCGG TGGCCGACCC CGACCGCCTT CCCGCCTCCA CCGGCCGCAC CGCCTACCGC
CTGGTCCAGG AGGGCCTGAC CAACGCCCGC AAGCACGCCT CCGGCCAGCC GGTGCGGGTG
CGCGTGGAGG GCGCTCCCGG CGAGGGCCTG GTGATCGACC TGCGCAACCC CGTGACCGGG
CCCGCCGGGG CCGCACCGGC CGGGGAGGGG TCCCCTCCGG TGCCGGGCAG CGGAACCGGG
CTGGTCGGCC TGACCGAGCG GGTGCGCCTG GCCGGGGGGC GTCTGGACCA CGAGCGCACA
CCCGAGGGCT TCCACCTGCA CGCCTGGCTA CCATGGCCGG CATGA
 
Protein sequence
MPSPIDDETR PARRSSPRAL AAVVVLVCLQ VAAAVWARWE GHTQPWTREL DLAVGFVVCV 
LSPVLLRWPV TGALGAAVLA VLSPAATPAA ALGVLQVAHR RPLPLALAVA AAAVAAHAVQ
GLFQPSAQIS YAWWLALITI ATGALVGWGA LARARRALVM SLRERARRAE AEQGRRVAEA
RMLERTRIAR EMHDVLAHRL SLLATYAGAL EYRPDAPPEQ LARAAGVVRT GVHQALEELR
EVIGVLREEE PEAGGRPQPV LSDVPRLVEE ARGAGERVEL RDAVADPDRL PASTGRTAYR
LVQEGLTNAR KHASGQPVRV RVEGAPGEGL VIDLRNPVTG PAGAAPAGEG SPPVPGSGTG
LVGLTERVRL AGGRLDHERT PEGFHLHAWL PWPA