Gene Ndas_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1917 
Symbol 
ID9245767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2337137 
End bp2337913 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content74% 
IMG OID 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003679850 
Protein GI297560876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.465769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.598754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA GCAGAAGGAT CACCTGGGAA GGCTTCTTCA ACACCCGCGA CCTCGGCGGC 
CTGCCGAGTC GGGACGGACG CGGCGTCCGC CGGGGCGCCT TCATCCGCTC CGCCGACCCG
CGCTTCGTCA CCGACAGGGG CTGGCGGGCC GCCTACGAGG CGGGTGTGCG CACCGTCGTG
GACCTGCGCA ACCCCGACGA GATCCGTCCG GCTCCGGGTG AGGGCCCCAC GAGCCGGGGC
GGGTCCGCCG CCTTCCCCGC GGATTCGGCC CCGACTCCCC TGCCCGCCGG GATGACGCGT
CTGGAGGTGG CCCTGGACCA TGTCGAGGAC GTCGGGTTCT GGCAGGAGGT CAACCGCCGA
CGGTTGAACG GGAGCCCGCT CTACTACCGC CCCTTCCTCG ACCGCAAGGC CGAACGCTGC
GCCGCGGTGG TCACCGCCCT GGCCCAGGCC GGGCCGGGCG GCGTCCTGTT CCACTGCGGG
GCCGGACGCG ACCGCACCGG ACTGGTCGCC CTGCTGCTGC TCGCCCTGGC CGACGTCGGA
GCCGAGGCGA TCGCCGACGA CTACGAGCTG TCCACGACCG AGCTCGTCCC GCTCTTCGCC
GCGATGGGCC AACCGGACCA GGGCCCCGTG ATCGAGGCCG TGCTGTCCGA GCGCGGCCTG
ACCCTGCGCG ACACCGTCCT GGACGCCCTG CGCGGGCTGG ACGCGCACGC CTACCTGCTG
GCGGCGGGGG TCGCGGAGGA GGACCTGGCC GTCCTCCGGG AACGGCTCCT GGACTGA
 
Protein sequence
MSDSRRITWE GFFNTRDLGG LPSRDGRGVR RGAFIRSADP RFVTDRGWRA AYEAGVRTVV 
DLRNPDEIRP APGEGPTSRG GSAAFPADSA PTPLPAGMTR LEVALDHVED VGFWQEVNRR
RLNGSPLYYR PFLDRKAERC AAVVTALAQA GPGGVLFHCG AGRDRTGLVA LLLLALADVG
AEAIADDYEL STTELVPLFA AMGQPDQGPV IEAVLSERGL TLRDTVLDAL RGLDAHAYLL
AAGVAEEDLA VLRERLLD