Gene Ndas_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1854 
Symbol 
ID9245704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2262824 
End bp2263456 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content73% 
IMG OID 
Productprotein of unknown function UPF0126 
Protein accessionYP_003679788 
Protein GI297560814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.485663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGC AGACCCTGAT CCTCGCCTTG GACCTCGTCG GCATCCTCGC CTTCGCCGTC 
GACGGGGCGC TGACCGGCAT CCGCACCGCG CGCCTGGACA TCGTCGGCGT CCTGGCCCTG
GGCGTGGTGA CCGCCCTGGG CGGCGGCGTC ATCCGCGACC TGCTGCTCGG CGTGACCCCC
GCGACCTTCC AGGACTGGCG CTACATCTGC ACGGCGCTGC TGGGCGCGAC CGCCGCGTTC
TTCCTCAGCA GGCAGCTCAC CCACCTGAAC CGGCCCATCC TCGTCTTCGA CGCGGCCGGG
CTGAGCCTGT TCGCGGTGAT CGGGGCGACC AAGGCCCTGG AGCTGGGTTT CGGCCCCCTC
CAGGCCACCC TGCTCGGCGT CGTCACCGGG GTGGGCGGCG GCACGATCCG CGACGTCCTG
CTGAACCGGG TGCCGACCGT GCTGAGCGCC AACTCGCGCC TGTACGCCGT CCCCGCCCTG
CTGGGCGCGG GCCTGGTCGC CGTCGCGTAC TGGGCGGGCC TGACCTGGGG GTGGATCGCC
GTGGTGGGGG CGGTGCTGTG CTTCGCCGTG CGGCTGCTGG CGCTGCTCTA CCGCTGGAAC
GCGCCCAGCC CGCCGGGTTC CCCTCCGCTG TGA
 
Protein sequence
MSTQTLILAL DLVGILAFAV DGALTGIRTA RLDIVGVLAL GVVTALGGGV IRDLLLGVTP 
ATFQDWRYIC TALLGATAAF FLSRQLTHLN RPILVFDAAG LSLFAVIGAT KALELGFGPL
QATLLGVVTG VGGGTIRDVL LNRVPTVLSA NSRLYAVPAL LGAGLVAVAY WAGLTWGWIA
VVGAVLCFAV RLLALLYRWN APSPPGSPPL