| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1800 |
|---|
| Symbol | |
|---|
| ID | 9245650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2200618 |
|---|
| End bp | 2201778 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | putative transposase IS891/IS1136/IS1341 family |
|---|
| Protein accession | YP_003679734 |
|---|
| Protein GI | 297560760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.31256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.500943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACGG GGTTTCGGTA CCGGCTCGCG CTCACCGACG AGCAGGCCGA GTCGTGCCAG
GTCTATGGCG ATATCTGTCG GGCGGTGTGG AACACCGGCC TTGACCAGCG CCGTGAGGCC
GTGTCCCGTT GGCGGCGCGG CCAGCGCCTG CCCTACTGCG GCTACCACCT CCAGGCCCGT
GAACTGGCCG AGGCCAAGAC CGAGGAGACC TGGCTTCAGG CCGCCCCCTC CCACATCCTC
CAGCAGACCC TGCGCGACCT GGACCGGGCC TGCCGGGACC ACGGCACGTT CAAGGTGCGA
TGGCGTGCCA AGGACCGGTG GAAGCCCTCC TTCCGCTTCC CCGACAGCGC ATGGATGAAG
GTCGAACGCC TGGGCCGCAG GTGGGCACGG GTCGAGCTGC CCAAGCTGGG GTGGGTACGG
TTCCGCTGGT CGCGCGCACC CCGGGGCACG GTCCGTTCGG CCACCGTCTC CCGCGACGGG
GCCTACTGGT ACGTGTCGCT GTTGTGCGAG GACGGCCAGG CCACACCGGA GGCACATGAG
CGTCCCGACA GCGCGGTAGG TGTGGACCGG GGTGTGGCGG TGGCGGTGGC CACCAGCGAT
GGAGACCTGC TCGACCAGGT GTTCCAGACC CCGAAGGAGG CCGAGCGCGA ACGCCGTCTG
CGCCGACGCC TGTGCCGCCA ACGCAAGGGG TCGGCGAACC GGGCCAGAAC CAGGGCCGCC
CTGTCCGCGT TGACCGGGCG GGTGCGGGCT CGGCGCTCCG ATTTCGCCGC CCAGACCGCG
CACACGCTGT GTGCCAAGAA CGCGGTCGTG GTGCTGGAAA AGCTCAACAC CACGAACATG
ACGGCCTCCG CGAAAGGCAC TGTTGAGGTG CCCGGCGTCA GCGTGCGTCA GAAGGCGGGG
TTGAATCGGG CGATTCTGGC CAAGGGCTGG CACGGCCTCA AGCTGGCCTG TCACAACGCG
GCCCGGCGCA CCGGGACCCG GATCGTGGAG GTTGATCCCG CGTACACGTC CCAGACCTGT
CACTCGTGCG GATACGTCGC GGCGGAGAAC CGAGAGAGCC AATCGGTCTT CTGCTGCGGC
AGGTGCGGGC ACACAGCGCA TGCGGACGTG AACGCGGCCC AGAACATTCT CACGCGCGGA
TGGACTAGCC CTTCGGGGTG A
|
|---|
| Protein sequence | MLTGFRYRLA LTDEQAESCQ VYGDICRAVW NTGLDQRREA VSRWRRGQRL PYCGYHLQAR
ELAEAKTEET WLQAAPSHIL QQTLRDLDRA CRDHGTFKVR WRAKDRWKPS FRFPDSAWMK
VERLGRRWAR VELPKLGWVR FRWSRAPRGT VRSATVSRDG AYWYVSLLCE DGQATPEAHE
RPDSAVGVDR GVAVAVATSD GDLLDQVFQT PKEAERERRL RRRLCRQRKG SANRARTRAA
LSALTGRVRA RRSDFAAQTA HTLCAKNAVV VLEKLNTTNM TASAKGTVEV PGVSVRQKAG
LNRAILAKGW HGLKLACHNA ARRTGTRIVE VDPAYTSQTC HSCGYVAAEN RESQSVFCCG
RCGHTAHADV NAAQNILTRG WTSPSG
|
|---|
| |