| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1704 |
|---|
| Symbol | |
|---|
| ID | 9245554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2075726 |
|---|
| End bp | 2076340 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003679639 |
|---|
| Protein GI | 297560665 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.326361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.417933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAA CGCGCGTCCA GGGCAAGCAC GCCGGTCTGA GTCGGCGCCA GGTACTGCGA
ACCGCCGTGG GGCTGGTCGA CGCCGAAGGA GTCGCTGCGC TGTCCATGCG GCGACTGGCG
CGTGAACTCG GGGTGGAGGC GATGACCCTC TACCACCACG TGCGCAACAA GGAGGCGCTG
GAAGACGCCA TCGTCGAACA CGTCCTCGCC GAGTCGATCC GTGAACCCCA GGCTTCAGAC
TCGTGGCAGG AGGCGATCAC CGGTTACGCG CTCGATGTGC ACCGAGGCCT GCTCGCCCAT
CCGGGGGTGG CCACCCTCTT CGCCACCCGC CCTGCCCTGA CCAGCCGGAA CCTTCGCGAA
CTCGAAGGCC TCCTGCGTAT CCTCACCGCG GCGGGTTTCG CCGCTGGGAC CGCCCTGACC
ATCGTGCACG TGACGGCCTC GTCCGTGCTC GGACAACACC TGACCAAGCA GGGCGAGAAC
TCCGGCGACC CTGTTCCCGG AAGTGCCGAC CTGCCCTTGG TGAACAAGGC CCTCGAAGCA
GGGCTGCCCG GTGTCGACGC CCGGATGAGG TTCACCCTGA CCGCACTCGT CACCGGTTAT
GAGAGTCTTC TGTGA
|
|---|
| Protein sequence | MSQTRVQGKH AGLSRRQVLR TAVGLVDAEG VAALSMRRLA RELGVEAMTL YHHVRNKEAL
EDAIVEHVLA ESIREPQASD SWQEAITGYA LDVHRGLLAH PGVATLFATR PALTSRNLRE
LEGLLRILTA AGFAAGTALT IVHVTASSVL GQHLTKQGEN SGDPVPGSAD LPLVNKALEA
GLPGVDARMR FTLTALVTGY ESLL
|
|---|
| |