Gene Ndas_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1548 
Symbol 
ID9245398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1895014 
End bp1895853 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID 
Productprotein of unknown function DUF75 
Protein accessionYP_003679483 
Protein GI297560509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.831749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.218022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC TCGTCCGGGA GCTTGTCGAT CCCGTGATGG TGGCGGCGTT CGAGGGATGG 
AACGACGCCG GTGAGGCGGC CAGCCTGGCC GTGGAGCACC TGTCGAGGGA GTGGGACGCC
TACGAGCTGT GCGCGCTGGC ACCGGACGAC TACTACGACT TCCAGGTGAC CCGGCCGCGC
ATGTCGATCG TGGACGGCGT GGTGGGCGAG GTCGAGTGGC CCACGACCCG GGTCCGCGTG
GCGACGCCGC CGGGGTCGGA GCGCGACGTG GTGCTGGTGA CGGGCCCCGA GCCGAACATG
CGGTGGCGCT CCTACGCCGC CGACCTGCTG GCCGTGGCTC GGGAGCTGGG CGTCACGCGG
ATGGTGATGC TGGGTTCGCT GCTGGCGGAC GCCCCGCACA CCCGGCCGAT CCCGGTGACC
GGGATGGCCT CGCCCGTGGA GCTGGGCTCG GCGCTGGGGC TGGAGGCGAC CACCTACTCG
GGCCCGACCG GGATCGTGGG CGTGGTGCAC GAGGCGTTCA GCGCGGTGGG GATCGAGACC
GCGTCGCTGT GGGCGGCCAT CCCCCACTAC GTCGCCCAGC CGCCGTGCCC GAAGGCCTCC
CTGGCGCTGC TGGCGTGGGT GGAGGACTTC CTGGGCGCGC GGGTGCCGCT GGGCGACCTG
CCCGAGGACG CGGTGGCGTG GGAGTCCAAC GTCAACGAGC TCACCGCCGA GGACGAGGAC
ATCGCGGCGT ACGTGCGCGG CCTGGAGGAG GCCAAGGACA CCGCCGACCT GCCGGAGGCC
TCCGGTGACG CCATCGCCCG GGACTTCGAG CGCTACCTGC GCCGCCACGA CGAGGGCTGA
 
Protein sequence
MTKLVRELVD PVMVAAFEGW NDAGEAASLA VEHLSREWDA YELCALAPDD YYDFQVTRPR 
MSIVDGVVGE VEWPTTRVRV ATPPGSERDV VLVTGPEPNM RWRSYAADLL AVARELGVTR
MVMLGSLLAD APHTRPIPVT GMASPVELGS ALGLEATTYS GPTGIVGVVH EAFSAVGIET
ASLWAAIPHY VAQPPCPKAS LALLAWVEDF LGARVPLGDL PEDAVAWESN VNELTAEDED
IAAYVRGLEE AKDTADLPEA SGDAIARDFE RYLRRHDEG