Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1514 |
Symbol | |
ID | 9245364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1857223 |
End bp | 1857912 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003679450 |
Protein GI | 297560476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0313038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.23375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGATCC TCGTCGCCGA CGACGACCCG CAGATCCTGC GCGCCCTCAG GGTGACCCTG CGCGCCCGCG GCTACGACAT CGTGGTCGCC ACCAACGGCG CCGACGCCCT CAACGCCGCC GTCGACCAGC GCCCGGACCT GTACGTGATC GACCTGGGCA TGCCGCACCT GGACGGGGTG GAGGTCATCG AGGGGCTGCG CGGCTGGACC AGCGCCCCGA TCCTCGTCGT CTCCGGGCGC ACCGACTCCG TGGACAAGGT CCAGGCGCTC GACGCGGGCG CCGACGACTA CGTCACCAAG CCCTTCGCCA TCGACGAGTT CCTGGCGCGG GTGCGGGCCC TGACCCGCCG GGGCGCGTGC GGCGACGCCG AACCGCTCGT CAGGCTGGGG GAGCTGACCG TGGACCTGTC GGCCAGGACC GTGACCCGCG AGGGCGGTTC GGGCGCGGAG GGCGTGCGGC TGACCCCCAC CGAGTGGCGC ATCCTGGAGA TCCTCATGCG CCACGCCGGG AAGCTCGTCA CACGCCAGAG GCTGCTGGCG GACGTGTGGG GGTCCGAGCA CGTCACCGAC ACCGGTTACC TGCGCCTGTA CGTCTCCCAG CTGCGCAAGA AGCTCGAACC CGACCCCAAG GCGCCGCGGT TCCTCATCAC CGAGCCCGGC ATGGGGTACC GTTTCCAGCC CCCCGGATGA
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Protein sequence | MRILVADDDP QILRALRVTL RARGYDIVVA TNGADALNAA VDQRPDLYVI DLGMPHLDGV EVIEGLRGWT SAPILVVSGR TDSVDKVQAL DAGADDYVTK PFAIDEFLAR VRALTRRGAC GDAEPLVRLG ELTVDLSART VTREGGSGAE GVRLTPTEWR ILEILMRHAG KLVTRQRLLA DVWGSEHVTD TGYLRLYVSQ LRKKLEPDPK APRFLITEPG MGYRFQPPG
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