Gene Ndas_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1514 
Symbol 
ID9245364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1857223 
End bp1857912 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003679450 
Protein GI297560476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0313038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.23375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATCC TCGTCGCCGA CGACGACCCG CAGATCCTGC GCGCCCTCAG GGTGACCCTG 
CGCGCCCGCG GCTACGACAT CGTGGTCGCC ACCAACGGCG CCGACGCCCT CAACGCCGCC
GTCGACCAGC GCCCGGACCT GTACGTGATC GACCTGGGCA TGCCGCACCT GGACGGGGTG
GAGGTCATCG AGGGGCTGCG CGGCTGGACC AGCGCCCCGA TCCTCGTCGT CTCCGGGCGC
ACCGACTCCG TGGACAAGGT CCAGGCGCTC GACGCGGGCG CCGACGACTA CGTCACCAAG
CCCTTCGCCA TCGACGAGTT CCTGGCGCGG GTGCGGGCCC TGACCCGCCG GGGCGCGTGC
GGCGACGCCG AACCGCTCGT CAGGCTGGGG GAGCTGACCG TGGACCTGTC GGCCAGGACC
GTGACCCGCG AGGGCGGTTC GGGCGCGGAG GGCGTGCGGC TGACCCCCAC CGAGTGGCGC
ATCCTGGAGA TCCTCATGCG CCACGCCGGG AAGCTCGTCA CACGCCAGAG GCTGCTGGCG
GACGTGTGGG GGTCCGAGCA CGTCACCGAC ACCGGTTACC TGCGCCTGTA CGTCTCCCAG
CTGCGCAAGA AGCTCGAACC CGACCCCAAG GCGCCGCGGT TCCTCATCAC CGAGCCCGGC
ATGGGGTACC GTTTCCAGCC CCCCGGATGA
 
Protein sequence
MRILVADDDP QILRALRVTL RARGYDIVVA TNGADALNAA VDQRPDLYVI DLGMPHLDGV 
EVIEGLRGWT SAPILVVSGR TDSVDKVQAL DAGADDYVTK PFAIDEFLAR VRALTRRGAC
GDAEPLVRLG ELTVDLSART VTREGGSGAE GVRLTPTEWR ILEILMRHAG KLVTRQRLLA
DVWGSEHVTD TGYLRLYVSQ LRKKLEPDPK APRFLITEPG MGYRFQPPG