| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1338 |
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| Symbol | |
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| ID | 9245188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 1645625 |
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| End bp | 1647253 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003679276 |
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| Protein GI | 297560302 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGAG CTATCCGCTG GAACATCGAC AAAACAGTCT TCTGGCCCGC GCTGATCATG
GTGATCGGCT TCAGCGCGCC GTTCGTGATC GCGCCGCAGA CGGGTGAACG CCTGCTCGGC
GAGGTCCTGT CCCGGCTCCA GTCCGACCTG GGCTGGGTGT ACATGTGGTT CGTCGCCGCA
CTCGCGGTAC TGCTCGTCTG GCTGCTCTTC AGCAGGTACG GCCGCATCAG GATGGGCGGC
CCCGACGACC GCCCCGAGTT CTCCACCCCC ACCTGGCTCG CGATGATCTT CACCGCCGCG
ATCGGCGGCG GCCTCATGTA CTGGGGGATC ATCGAGTGGG CGCACTACCA CGTGGATCCC
CCGTTCCAAC TCGAACCGCA CAGCGCAGAG GCCGCCGAGT GGTCGGCCAC CTACCCCCTC
TTCCACTGGG GTCCCACCGC CTGGGCGGTC TTCTGCGTAC CGACCCTGGC CCTGGCCTAC
GCCTACCACG TGCGTAGAAT CCGCCGCCTG CGCCTGAGCG AGGCCTGCCG CGGGGTGCTC
GGCGACCGCG TCGACCGCTG GCCGGGGCGC CTGATCGACG TCTTCTTCAT CCTCGGGATG
ATCGGGGCGG CGGGGACCTC GCTGGCCCTG GCCGTGCCCA CCGTCGCCGA GGGCGCCTCC
CGCATGCTGG GCTTCGAGCC GGGCCCCACC CTCAACACCA TCGTCATCGG CCTGTGGACC
GTGCTGTTCG GGGGCAGCGT AGCCCTGGGC CTGCACCGCG GCCTCAAGCG CCTGGCCAAC
CTCAACCTCT ACCTGGCCGC CGCCCTGGGC GTCCTGGTCC TGGTGCTGGG CCCGGCGGTC
TTCGTCATCG ACACCTTCAC CAACAGCGTC GGCATGCTCG CCCAGAACAT CGTGCGGATG
AGCACCTACA CCGATCCGGT CGGCGGGTCC GGCTTCGAGG AGATCTGGAC GGTCTTCTAC
TGGGGCTGGT GGATCTCCTA CGGACCCTTC GTCGGCATGT TCTGCGCCAA GATCTCCAAG
GGGCGCACCG TCCGGCAGAT CATCGTCGGC ATGTGCGGCT TCGGCAGCCT GGGCTGCTGG
CTCTCGTTCG CGCTGCTCGG CAACTCCAGC ATGGCCTTCG AGCTGAGCGG ACAGGCGCCC
ATCGTCGACA CCCTGGAGGC CGAGGGCGCG GTCCCGGCCA TCTTCGCCAC GCTGGAGGCG
TTCCCGCTCA GCTGGATCAT CACCCCGCTG TTCCTGCTGC TGTTGCTGGT CTTCCTGGCC
ACCACGCTGG ACTCCGCGTC CTACATCATG GGCTCTGCCA CCTCCCGTGA CCTGCCCAAC
GAGGTCGAGC CCTCCCGGGC CAACCGCGTG CTCTGGGCGA TCGTCCTGGC CGCGGTGTCG
GTCTCGGTGA TGTCGGCCGG AGGCACCGAC GCGTTGCAGA CCCTGTCGGT CGTGACCGCC
TTCCCGCTGA TCTTCATCCT GAGCCTGGTC GCCGCCTCCC TGGTGCGCTG GCTCCGCGAG
GACGAGCGCT ACCGTTCCGG CACTGCGAGC CCCACTCCCG GCCCCGGGAC CGCCGAGCCC
GGTCCGGACC GAGGGGAGGA AGCCGGACTG GAAACGCCTC CCTCCCCACC GGCGGCGGCT
GCGAGGTGA
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| Protein sequence | MTRAIRWNID KTVFWPALIM VIGFSAPFVI APQTGERLLG EVLSRLQSDL GWVYMWFVAA
LAVLLVWLLF SRYGRIRMGG PDDRPEFSTP TWLAMIFTAA IGGGLMYWGI IEWAHYHVDP
PFQLEPHSAE AAEWSATYPL FHWGPTAWAV FCVPTLALAY AYHVRRIRRL RLSEACRGVL
GDRVDRWPGR LIDVFFILGM IGAAGTSLAL AVPTVAEGAS RMLGFEPGPT LNTIVIGLWT
VLFGGSVALG LHRGLKRLAN LNLYLAAALG VLVLVLGPAV FVIDTFTNSV GMLAQNIVRM
STYTDPVGGS GFEEIWTVFY WGWWISYGPF VGMFCAKISK GRTVRQIIVG MCGFGSLGCW
LSFALLGNSS MAFELSGQAP IVDTLEAEGA VPAIFATLEA FPLSWIITPL FLLLLLVFLA
TTLDSASYIM GSATSRDLPN EVEPSRANRV LWAIVLAAVS VSVMSAGGTD ALQTLSVVTA
FPLIFILSLV AASLVRWLRE DERYRSGTAS PTPGPGTAEP GPDRGEEAGL ETPPSPPAAA
AR
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