Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1132 |
Symbol | |
ID | 9244982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1388178 |
End bp | 1389524 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
Protein accession | YP_003679079 |
Protein GI | 297560105 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.175074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCG CACTCCTAGC CCTGGCGGCC TTCATCGCCG TGATCATCGT CTGGAACGTC GTGTTCAAAC GGAACATGGG CGAGGCGATG CTGCTCGGAC TGGTCGTCAC CGCGCTGTTC GCCGGGGCGC AGGCGCCCGC GTACCTGCTG CGGGGGCTGG TCGACGCCCT CACCCACGAG GTGCTCTACG CGGCCCTGGC CTTCGTGTTC ATGGCCTACC TGATCGACGT CACGGGCCTG ATCCAGCGGA TCCTGGCCAT CCTGAACTCC CTCTTCGGAC GCGTCCGCGG CGGCCCCGCC TTCATCGACA CGGCCGGTTC CGCGGTCTTC GGCGCCCTGT CCGGGTCCAA CTCCGCCAAC ACCGCCTCCA GCGGCTCCTT CACCGGCCCC TGGATGGTGC GCACGGGGTG GTCCCCCACC CGCGCCGCCA CGGTGATGGC CGGCAACGGG GGGATGGGCG CGGCCCTGCC CCCCAGCGCC TCCATGGTCA TCATGATCGG CTTCGCCGGG GGCATGGTCA GCACCGGCCA GGTCTACATG GGCCTGCTCG CGGCCGGGAC CTACCAGATC CTGCTCAGGT TCGCCCTGAT CGCGTACTTC GTGCGCAGGG ACGGCATCCC CAGGGCCGAC GAGACCGACC TGCTGCCCCT GCGCGAGTCC CTGCGGCAGG GTGCGGGAGC CCTGACCATC TTCCTGGGCG CGCTCATCCC GATCGTGATC ACGGCGGGGC CCCTGGCCGA CTACCTGGAG AACTCCACCC CGCTCGGCGG GGCCGTGGGG GAGATTTCGC TGCTGATCTG GATCCCGATC CTGATCATCG TGTTCTCCCT CGTCGCCGGA CGCGACCGTC TGCCCCGGAA CCCGCGGGAC TGGTCGGCCC TGCTCGACGG CGCCCTGCCC AAGTTCGCCA CCATCGGGGC CCTGCTGTTC TTCGCCATCG CGGCCAGCGA GATCCTGGCC CGCCTCGGCC TCGCGGAGGA CGTCAACACC CTGCTGGAGA ACCTGCCGGT CAACCGCGTC CTGCTGGTGG TGGCCGTCGG ACTGGTGGTC ACCCTGGTCG CCGGGCCGCT CTCCTCCACG GCGACCCTCA CCGCGGTCGG GCAGATCTCC TTCCTGGCAC TGGTGGGCGT GGGGGTCGAC CCGCTCCTGG CGGTGATCGC CATCCTGGTG TTCGCCTCCA CCGAGGGGGC CTCCCCGCCC GCGTCCGGGT CGATCTTCGT GGCGGCCGGA CTGACGGGCG CCCGACCCGA GAGCACCTTC CTGCCGCTGA TCGTCTACTA CATGATCCCG ATCTTCCTGA TCGGCTGCCT CATCGGTTGG GGCGTCCTAC CGGTCTTCGG AGGCTGA
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Protein sequence | MPIALLALAA FIAVIIVWNV VFKRNMGEAM LLGLVVTALF AGAQAPAYLL RGLVDALTHE VLYAALAFVF MAYLIDVTGL IQRILAILNS LFGRVRGGPA FIDTAGSAVF GALSGSNSAN TASSGSFTGP WMVRTGWSPT RAATVMAGNG GMGAALPPSA SMVIMIGFAG GMVSTGQVYM GLLAAGTYQI LLRFALIAYF VRRDGIPRAD ETDLLPLRES LRQGAGALTI FLGALIPIVI TAGPLADYLE NSTPLGGAVG EISLLIWIPI LIIVFSLVAG RDRLPRNPRD WSALLDGALP KFATIGALLF FAIAASEILA RLGLAEDVNT LLENLPVNRV LLVVAVGLVV TLVAGPLSST ATLTAVGQIS FLALVGVGVD PLLAVIAILV FASTEGASPP ASGSIFVAAG LTGARPESTF LPLIVYYMIP IFLIGCLIGW GVLPVFGG
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