| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1123 |
|---|
| Symbol | |
|---|
| ID | 9244973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1379461 |
|---|
| End bp | 1380234 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003679070 |
|---|
| Protein GI | 297560096 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.768218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.140519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA ACGCGCCCGC CCTGGAGATG GACGGGCTGA CCAAGGTCTT CAACGGCACG
ACGGCGGCGG ACGGCGTGAG CCTGTCCGTG CCTCGGGGAG CCATGCTCGG GCTGGTCGGC
CCCAACGGGG CGGGCAAGAC CACCTCGCTG TCCATGGCGG TGGGGCTGCT GCGCCCCGAC
GCCGGGACGG CCCGGGTGCT GGGCGTGGAC GTGTGGGCGG ACCCGGTCGG GGCCAAGCGC
CTGCTCGGCG TGCTGCCCGA CGGCCTGGCC CTGCCCGAGC GGCTGACCGG CGGGGAACTG
CTGAACTACT GGGGGCAGCT GCGCGGGCTG GGCCGGGAGG TGACGCGGGC GCGCGCCGAG
GAGCTGCTGC GGGTGCTGGA GCTGGACCGG GCCGAGGGGG ACGGGGTGCT GGTGGCGGAG
TACTCCACCG GCATGCGCAA GAAGATCGGG CTGGCCACGG CGCTGCTGCA CGCGCCCGAG
GTCCTGGTCC TGGACGAGCC CTACGAGGCC GTGGATCCGG TCTCGGCGCG GGTGCTGACC
GCGATCCTGC GCAGGTTCAC CGACGGCGGC GGCACGGTGG TGATCTCCAG CCACGTGATG
GCGCTGGTGG AGCAGCTCAC CGACCGGGTG GCCATCATCG CCCGCGGCCG GGTGCTGGCC
GACGGGGCGC TGGAGGAGGT GCGCGGCGTG GACACCACCC TGGAGGACAC CTTCGTGCGG
CTGGTGGGCG CACGCGAGAT GGAGGAGGGT GAGCTGGCGT GGCTGGCCTC CTGA
|
|---|
| Protein sequence | MSENAPALEM DGLTKVFNGT TAADGVSLSV PRGAMLGLVG PNGAGKTTSL SMAVGLLRPD
AGTARVLGVD VWADPVGAKR LLGVLPDGLA LPERLTGGEL LNYWGQLRGL GREVTRARAE
ELLRVLELDR AEGDGVLVAE YSTGMRKKIG LATALLHAPE VLVLDEPYEA VDPVSARVLT
AILRRFTDGG GTVVISSHVM ALVEQLTDRV AIIARGRVLA DGALEEVRGV DTTLEDTFVR
LVGAREMEEG ELAWLAS
|
|---|
| |