Gene Ndas_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1111 
Symbol 
ID9244958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1362417 
End bp1363382 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content73% 
IMG OID 
ProductUspA domain protein 
Protein accessionYP_003679058 
Protein GI297560084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.213436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.375797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACCA CCGACGAGGA GGGCGTCCGG GCACACCGCG GCACGGAGGG GATCGTCGTG 
GGTGTGGACG GCTCACCGGG GAGCCGTGCG GCACTGGACT GGGCTGCCCG GGCGGCGGCC 
GACCGCGGTC TGGAACTGCT GGTCCTGCAC GCACTGAGCA TGCCCGTGAT CAGCGCGCCG 
CTGGGGTTCA CGGGGCGGGT GCCGCCCACA CCGGAGCTCG CGGACTGGGC CGAGCGCCTG 
CTCCGGGAAG CCGTCGACCA CGTTGCGCGG ACCCGTCCCG GATTGGAGTT GCGCACCGAG 
GTCTCCAAAC TGGATCCGGC CCGCGCCCTG CTCACGGCCT CGCGGTCGGC TGAGATGGCC 
GTCGTGGGCT CGCGCGGCCT GGGCGGTACC GCTTCGGTGT TCCTGGGCTC GGTGAGCGTC 
CGCGTCAGCG CTCACGCGAC ATGTCCCGTC GCCGTGGTGC CGGGCCCCGA CGAGGCTGTC 
GGCGGAGGGG ATCCCCGTGT GCGAGGGGAG CGCGGGCGCG TCGTGGTCGG ATTGGACGGT 
TCCGCGGGCG GACGGGCCGC GCTGCGCTTC GCCCTGGACG AGGCGGCCCG TACCGGCGCC 
GAACTCGTGG CGGTGCACGC CTGGGAGATA CCGAACCCCG TCGACGTCAC GGCGCTGGAT 
CCCGCCGCGC ACGCCGCGGT CCGCGAGTAC CTGGTCTCGC GCGCCGACGA ACACGTGCGT 
GCCCTGGTCG AAGAGGCCCG CACCGAGCGC ACCGGAGACG TTCCGGTGCG GGTCGAGGTC 
GTTCAGGATC AGGCCGCCCA CGCACTGTTG ACCAGGGGCG ATGATGCCGA CCTCATCGTC 
GTCGGTTCGC GGGGACGCGG TGGTTTCGCC GGTCTCCTGC TGGGATCGGT CAGCCAGACG 
GTGCTGCACC ACGCCCGCGT GCCGGTGGTC GTGGCGCGTT CCCGCTCGGG GAGGAGCGGG 
GACTGA
 
Protein sequence
MGTTDEEGVR AHRGTEGIVV GVDGSPGSRA ALDWAARAAA DRGLELLVLH ALSMPVISAP 
LGFTGRVPPT PELADWAERL LREAVDHVAR TRPGLELRTE VSKLDPARAL LTASRSAEMA 
VVGSRGLGGT ASVFLGSVSV RVSAHATCPV AVVPGPDEAV GGGDPRVRGE RGRVVVGLDG 
SAGGRAALRF ALDEAARTGA ELVAVHAWEI PNPVDVTALD PAAHAAVREY LVSRADEHVR 
ALVEEARTER TGDVPVRVEV VQDQAAHALL TRGDDADLIV VGSRGRGGFA GLLLGSVSQT 
VLHHARVPVV VARSRSGRSG D