Gene Ndas_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0898 
Symbol 
ID9244743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1100519 
End bp1101979 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content74% 
IMG OID 
ProductUDP-N-acetylmuramate/alanine ligase 
Protein accessionYP_003678848 
Protein GI297559874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGG TGCGGCCGAC CGAGCCGGTG CCCGTGGACA AGCTGGGCCG TACCCACTTC 
ATCGGCCTGG GCGGAGCGGG CATGTCCGGC ATCGCCCGCG TGCTGCTCCA GTCGGGGGTG
GAGGTCTCGG GCAGCGACGC CCGCGACAGC GACACCCTGC GCGAACTGGA GCAGATGGGC
GCCGACGTCC ACGTGGGACA CGCCGCCGAC AACCTCGGCA CGGCGGAGAC CCTGGTGGTC
TCCTCCGCCA TCCGCGAGGA CAACCCCGAA CTGGTCGAGG CGCGCCGCCG GGGCCTGCGC
GTGCTGCCCC GGGCCGCGGC CCTGGGCGCG CTGCTGCTGG GCCGCGAGGG CGTCGCCGTC
TCGGGCACCC ACGGCAAGAC CACCACCACG TCCATGGTCG CGGTGGTGCT CCAGCACGTG
GGCGCCGACC CCGGCTACGT CATCGGCGGC AAGCTGGTCA CCACCGGCCT GGGCGCCGAC
GCCGGCATCG GCGAGGTCAT CGCGGTGGAG GCCGACGAGA GCGACGGCTC CTTCCTCATG
CTCTCGCCCA AGATCGCGGT GGTCACCAAC GTCGAGGCCG ACCACCTGGA CAACTACAGC
GGTATCGAGG AGATCCACGC CAACTTCGCC TCGTTCGTCG ACCGGGTCGA GCGCACGCTC
GTCGTGGGGG TGGACGACCC CGGCGCCCGC CGGGTGGCCG AGCTGGCCCG CGAACGCGGC
AAGCGGGTGC TCACCTACGG CGAGGCCGAG GACGCCGACT ACCGCGTCAC CCGGGTGCGC
GCCCGCGGCT TCACCACCGA GTTCACCATC CGCACCGCGA ACGGCGAGCC CGTGGACGGC
CAGCTCGCCG TACCGGGCCG CCACAACGTG CTCAACGCGG CCGCGGCCGT CGCGGTCGCC
GACGAGCTGG GCCACGACCT GGAGGTGGCG GTCGAGGGCA TCGCCGACTT CGCCGGCGCC
GCGCGCCGCT TCGAGCCCAA GGGCGAGGCG GGGGGAGTGG CCGTCTACGA CAGCTACGCC
CACCACCCCA CCGAGATCGA GGCCGACCTG CGCGCGACCC GTGCGGCGCT GGAGTCCCTG
GCCGAGGAGG CGCGCGAGGA CGGTCGTGAG CACGCCGGGG GCAGGGTCGT CGCCCTGTTC
CAACCGCACC TGTACAGCCG CACCCGCATC TTCGCCGAGG AGTTCGCCGC CGCGCTGGGC
CTGGCCGACG AGGTCGTGGT CACCGAGGTC TACGCCGCCC GCGAGGACCC CGAGCCCGGG
GTCACGGCGG AGCTGATCAC CTCGCGTGTC GCGCACGACC GCGTGTGGTA CGTGCCCGGC
CGCGACGACG CCGTGCTCCG GGTGGCCGAG TTGGCCGGCC CCGGCGACAT CGTGCTCACC
ATGGGCGCGG GCGACGTCAC CGAGCTGGGC CCGCGCATCG TCGAGGCGCT CGCGCAGAGG
GCCGACGGCC TCGGGGGCTG A
 
Protein sequence
MSLVRPTEPV PVDKLGRTHF IGLGGAGMSG IARVLLQSGV EVSGSDARDS DTLRELEQMG 
ADVHVGHAAD NLGTAETLVV SSAIREDNPE LVEARRRGLR VLPRAAALGA LLLGREGVAV
SGTHGKTTTT SMVAVVLQHV GADPGYVIGG KLVTTGLGAD AGIGEVIAVE ADESDGSFLM
LSPKIAVVTN VEADHLDNYS GIEEIHANFA SFVDRVERTL VVGVDDPGAR RVAELARERG
KRVLTYGEAE DADYRVTRVR ARGFTTEFTI RTANGEPVDG QLAVPGRHNV LNAAAAVAVA
DELGHDLEVA VEGIADFAGA ARRFEPKGEA GGVAVYDSYA HHPTEIEADL RATRAALESL
AEEAREDGRE HAGGRVVALF QPHLYSRTRI FAEEFAAALG LADEVVVTEV YAAREDPEPG
VTAELITSRV AHDRVWYVPG RDDAVLRVAE LAGPGDIVLT MGAGDVTELG PRIVEALAQR
ADGLGG