Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0757 |
Symbol | |
ID | 9244599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 928137 |
End bp | 929714 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003678708 |
Protein GI | 297559734 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0933075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGACGG AGGAGAGGCG GCCAGCCCCC GGCGGGCCGC TCCTGACGAT GCGCGACATC CGCAAGGACT TCCCCGGCGT GCGGGCCCTG GACGGGGTGT CGCTGACCGT CGGCCACGGC CGCGTCCACG CCCTGATGGG GGAGAACGGC GCGGGCAAGT CGACGCTGAT GAAGGTGCTC AGCGGGGTCC ACCCCACGGG TTCCCACGGC GGCGAGATCC TCATGGACGG ACAGCCCTGC TCCTTCTCCG GCGTGGCCGA CAGCGAGCGC GCGGGCATCG CCATCATCCA CCAGGAACTC GCCCTCATCC CGCAGCTGTC CATCAGCGAG AACGTCTTCC TCGGCCACGA ACAGGCCCGC TACGGCGTCC TGGACTGGGG CGCCACCCAC GCCCGGGCCC GCGAACTCCT GCGCCGGGTC GGCCTGGACG AGAACCCGGC CACGCCCGTC TCGGCGCTGA GCGTGGGCGC CAGACAGCTC GTGGAGATCG CCAAGGCCCT GGCCAAACGG GTGCGGCTGC TCATCCTGGA CGAGCCCACC TCCGCGCTGA ACGAGGCGGA GAGCACCCGG CTGCTCGAAC TCCTCCTGGA CCTGCGCGAC CAGGGCGTCA CGTGCATCCT CATCTCGCAC AAGCTCGGCG AGGTGGTGCG CGTGTGCGAC GAGGTCACCA TCCTGCGCGA CGGCCGCGCC GTCGAGACCC TCGCCGTGGA GCGCGACGCC GACGGCAACC CCTCGATCGA CGAGGACCGC ATCATCCGCG GGATGGTCGG CCGCGCTCTG GACCAGCGCC ACCCCCCGCG CACCGGCGAG GTCGGCCGGG TGCGCTTCGA GGTCCGCGAC TGGACGGTGG ACCACCCCAC CCAGGCCGGA CGGCGCGTGG TGGACGGGGT CGACCTGACC CTGCGCGCCG GGGAGGTCGT GGGCATGGCC GGCCTCATGG GCGCCGGGCG CACCGAGTTC GCGATGAACC TGTTCGGCCG CTCCTACGGG CGCCGCGTCC GCGGCACCCT GCTCAAGGAC GGCGCCGAAC TCGCGACCGC CAGCGTCGCC GACGCCATCC GCGGCGGTCT CGCCTACGTG CCCGAGGACC GCAAGACCCT CGGCCTGCTC CTCGACGACG ACATCCGCCA CAACACCACG CTGGCGGCCC TGGACCGCGT GTCCGCGCGC GGCGTCCTCG ACCCCGGCCT GGAGGTGGTG GAGGCCGCCC GGATGAGCCA GAGCATGCGG GTCAGGAGCC AGGGCCCCGC CCAGACCGTG CGCACCCTCA GCGGCGGCAA CCAGCAGAAG GTCGTCCTGG GCAAGTGGAT GTTCACCCGA CCCGAGCTGC TGATCCTCGA CGAGCCCACC CGCGGCATCG ACGTCGGCGC CAAGTACGAG ATCTACCTCA TCGTCCGCCG CCTGGCCGCG GAGGGCGCCT GCGTGCTGCT GATCTCCTCC GAACTCCCCG AGATCCTCGG CATGTGCGAC CGGATCTACA CGATGTGCGA GGGGCGCATC ACCGGAGAGG TCCCCGGTGA GGGGGCCGAC CAGGAAACCC TCATGAGACT GATGACGCGA ACCGGGGGAC ACCCGTGA
|
Protein sequence | MTTEERRPAP GGPLLTMRDI RKDFPGVRAL DGVSLTVGHG RVHALMGENG AGKSTLMKVL SGVHPTGSHG GEILMDGQPC SFSGVADSER AGIAIIHQEL ALIPQLSISE NVFLGHEQAR YGVLDWGATH ARARELLRRV GLDENPATPV SALSVGARQL VEIAKALAKR VRLLILDEPT SALNEAESTR LLELLLDLRD QGVTCILISH KLGEVVRVCD EVTILRDGRA VETLAVERDA DGNPSIDEDR IIRGMVGRAL DQRHPPRTGE VGRVRFEVRD WTVDHPTQAG RRVVDGVDLT LRAGEVVGMA GLMGAGRTEF AMNLFGRSYG RRVRGTLLKD GAELATASVA DAIRGGLAYV PEDRKTLGLL LDDDIRHNTT LAALDRVSAR GVLDPGLEVV EAARMSQSMR VRSQGPAQTV RTLSGGNQQK VVLGKWMFTR PELLILDEPT RGIDVGAKYE IYLIVRRLAA EGACVLLISS ELPEILGMCD RIYTMCEGRI TGEVPGEGAD QETLMRLMTR TGGHP
|
| |