| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0657 |
|---|
| Symbol | |
|---|
| ID | 9244499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 805194 |
|---|
| End bp | 806162 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003678608 |
|---|
| Protein GI | 297559634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.171707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.684803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA TCGACCAGAC CTCCGCCTCC GCCGTCCGCG AGCGCGCCAC CGGGGGCGCC
GGGACGGGCG GTCCGAGCGG CCCCCGGCCC GTCTACCGCC GCGGCCCGCT GCGCCGCCTG
CGCCGCCTGC CGCTGTACCT GGCCGGCCTC GCGGTGTTCC TGTTCTCGGT GTTCCCCGTG
TACTGGATGG TCATCACGGC CTTCAAGCCG GTGGGCGAGA TCTTCACCCG CGACCAGACG
ATCTTCCCGA CGGCGCCGAC CCTGGAGCAC TTCGACCGGG TGCTCAACGG CCAGCTGATC
CCCGGGGTGA ACTTCTGGCA GTTCCTGGGC AACAGCCTGT TCCTCACCGT GGCCTCCGTG
GCCATGGGAG CGTTCCTGTC GCTGCTGGCC GCCGTGGCCG TGGCCCGGTT CCGCTTCCGG
CTGCGCACCG CCTTCATCAT CCTGCTGCTG GTGATCCAGA TGGTGCCGAT GGAGGCGATG
ATCATCTCCA TCTTCATCAA CTTCCGGCAG CTGTCCGACG TCAGCGGCGT GGAGCTGCTC
GGCAACCTGT CCGGCCTGCT CATCGTGTAC ACGGCCGTGT CCCTGCCGAT CACCATCATG
ATGCTGCGGG GCTTCGTGGC CGCGGTGCCC AAGGAGCTGG AGGAGGCCGC GGCCATCGAC
GGCGCCAGCT CCTGGACCGT CTTCTGGCGC ATCCTGATGC CCCTGGTCGC GCCGGGCCTG
GTCGCGGCGA GCATCTTCGC CTTCATCACC GCGTGGAACG AGTTCATCGT CGCGCTGACG
TTCCTGGGCC GCAGCACCGA CAACTACACG CTGCCGCTGA CGCTGTCCTA CTACTTCGGC
CGGTTCGGCA CCGAGTGGGG GCCGATCATG GCCGCCTCCA CCCTGCTGAC CATCCCCGTG
ATGATCTTCT TCCTGTTCGT CCAGCGGCGC ATGGTCTCCG GCCTGACCAT GGGCGCGGTC
AAGGGCTGA
|
|---|
| Protein sequence | MTAIDQTSAS AVRERATGGA GTGGPSGPRP VYRRGPLRRL RRLPLYLAGL AVFLFSVFPV
YWMVITAFKP VGEIFTRDQT IFPTAPTLEH FDRVLNGQLI PGVNFWQFLG NSLFLTVASV
AMGAFLSLLA AVAVARFRFR LRTAFIILLL VIQMVPMEAM IISIFINFRQ LSDVSGVELL
GNLSGLLIVY TAVSLPITIM MLRGFVAAVP KELEEAAAID GASSWTVFWR ILMPLVAPGL
VAASIFAFIT AWNEFIVALT FLGRSTDNYT LPLTLSYYFG RFGTEWGPIM AASTLLTIPV
MIFFLFVQRR MVSGLTMGAV KG
|
|---|
| |