Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0528 |
Symbol | |
ID | 9244369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 647120 |
End bp | 647977 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
Protein accession | YP_003678481 |
Protein GI | 297559507 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.795075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCCGAGA ACACCGCACC GAAGTCCCAG GCCGCCGCAG ACCACACGAC CGTCATCCCC AGGCCGCGCA GGCCGATGCC CGGCGAGGAC GCCACGGCGG AGGAGCTGCT ATCCGTACTC GTGAGGCTGG GGGAGGGGGA CCCGCAGGCC AACGGGCTGC GTGAACGGGT CATGGTCCTC TACCAGCCGT TGATCAACAA GATCGCGCGC CGCTACGGGG GGCGCGGCGA GCCGCTGGAG GACCTGAAGC AGACCGCGAT GGTGGGGCTG GCCAAGGCCG TGCGCGGTTA CGACCCGGCC CGCGGCAAGC CCTTCATCTC CTACCTGCTG CCCACGGTGA CGGGGGAGAT CAAGCGGCAC TTCCGCGACC ACACCTGGGC GGTGCGGGTG CCGCGCCGCC ACCAGGAGAA CCGGGTGAAG CTGCGCCGGG TCACGAGCGA GTTCCAGCAG CGGCACGCGC GCACGCCCAC GATCGCGGAG CTGGCCCACG ATATGGGGCT GCCCGAGGCC GAGGTCAGCG AGCTGACACA GGTCTCGGAG TCCTACCGGT CGCTGTCCCT GGACGCGCCC GACTCCTCCG ATTCCGAGGG GCAGGAGGGC ACGCGCCTGG AGGACCACCT GGGCTGTGAG GACGCGGCGC TGGACCGGGT GGTGGAGCGC GAGTCGCTCA AGCCCGCGCT GGCGCGCCTG CCCGCCCGCG AGCGGGAGAT CCTGCGGCTG CGGTTCTTCG GGGACCACAC CCAGTCCGAG ATCGCGGACC GGTTGGGGTA CTCCCAGATG CACGTGTCCC GGCTGCTGTC GGGAGTGCTG GAACAGCTGC GCGAGGAGGT CGGCGCGGCC GGACCGGACC GCTCCTGA
|
Protein sequence | MSENTAPKSQ AAADHTTVIP RPRRPMPGED ATAEELLSVL VRLGEGDPQA NGLRERVMVL YQPLINKIAR RYGGRGEPLE DLKQTAMVGL AKAVRGYDPA RGKPFISYLL PTVTGEIKRH FRDHTWAVRV PRRHQENRVK LRRVTSEFQQ RHARTPTIAE LAHDMGLPEA EVSELTQVSE SYRSLSLDAP DSSDSEGQEG TRLEDHLGCE DAALDRVVER ESLKPALARL PAREREILRL RFFGDHTQSE IADRLGYSQM HVSRLLSGVL EQLREEVGAA GPDRS
|
| |