| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0249 |
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| Symbol | |
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| ID | 9244083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 308080 |
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| End bp | 310050 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003678204 |
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| Protein GI | 297559230 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.852341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGGAC GCCTGCCCAT CCTCGATATC TCTCCAGAGA ACGACCTCGG ACCGGTGAAA
GCCGTTCCGG GCGAACGCTT CACCGTGGGA GCGACGGTGA TCCGCGAGGG CCACGACTCC
CTCGCCGCGG GCGTCGTCGT CTACTCCCCC GAGGGACGCC GCGAACAGCT CGTCCCCATG
CGCGAGCACG CCCCCGGCAC CGACCGCTAC GAGGCCTGCG TCAGCCTCCC CACGGAGGGG
ACGTGGTCCT TCGCCGTCGA GTCGTGGACC GACCCCTTCG CCACCTGGCA CCACGTCGCG
GGCGTCAAGC TCCCGCTGGG CCAGGACACC GAACTCGTCC TGGAGGAGGG CGCCCGCCTG
CTCGCCCGCG CCGGGCGACG GGTCCCGCGC CGCCCCTTCC TGAACGCCGC CGCCAAGGCG
CTGCGCGACA CCTCGATGAC CCCGGTGGAG CGCTTCGAGG CGGCGCTCAC CCCCGAGGTC
CTGGCCGAGA TGGAGCGCGC GCCCCTGCGC GAGCTGGTCA CCAGGTCCAA GCGCACCAGC
GTCGTCGTCC ACCGCGAGCG CGCGCTGTTC GGCTCCTGGT ACGAGTTCTT CCCGCGCTCG
GAGGGCGCCC AGGTCGACAC CGCGCCCGGC CAGGAGCTCT CGGGCACCCT CGCCACCGCG
GCCAAGCGCC TGCCCGCCAT CGCCGACATG GGCTTCGACG TGGTCTACCT GCCGCCCATC
CACCCGGTCG GCACCACCCA CCGCAAGGGC GCCAACAACG CGCTGACCGC CGGTCCCGGC
GACCCCGGTT CGGTGTGGGC CATCGGGTCG GCCGACGGCG GCCACGACGC GGTCCACCCC
GACCTGGGCA CCCTCGCCGA CTTCGACGCC TTCGTCGCCG AGGCCCGCGA GCACGGCATG
GAGATCGCCC TGGACCTGGC CCTGCAGTGC TCCCCCGACC ACCCCTGGGT GACCGAGCAC
CCCGAGTGGT TCACCGCCCG GGCCGACGGC TCCATCGCCT ACGCCGAGAA CCCGCCCAAG
AAGTACCAGG ACATCTATCC GCTCAACTTC GACCGCGACT TCGAGGGCCT GTACGCGGAG
GTCCTGCGGG TGGTCGAGCA CTGGATCGCG CACGGCGTAC GCGTCTTCCG CGTCGACAAC
CCGCACACCA AGCCGGTCGC TTTCTGGCAG AAGCTGCTCG CCGACGTCGC CGACAGGCAC
CCCGACGTGC TGTTCCTCGC CGAGGCCTTC ACCCGCCCCG CCATGATGCG CACGCTGGCC
AAGGTCGGCT TCCACCAGTC CTACACCTAC TTCACCTGGC GCAACGGCAA GGACGAGCTG
ACCGACTACC TCACCGAGCT GAGCCGGGAG AGCGCCCACT ACCTGCGCCC CAACCTCTTC
GCCAACACCC CGGACATCCT GCACGCCTAC CTCCAGCACG GCGGTCGGCC CGCGTTCGCC
GTCCGCGCCG TGCTGGCGGC CCTGCTCTCC CCCACCTGGG GCGTCTACTC CGGCTTCGAA
CTGTGCGAGA ACACCCCCGC CGGGCCGGGC AGCGAGGAGT ACCTCGACTC GGAGAAGTAC
CAGTACCGCC CCCGCGACTG GGCCGCGGCC GAGGCCTCCG GCGAGACCCT CACCGGCCTC
ATCACGCTGC TCAACCGGCT GCGCCGGGAG CACCCGGCCC TGCGGGAGCT GCGCAACCTG
CGCTTCCACC ACGTGGACCG GCCCGAGATC GTCTGCTTCT CCAAGCACCG GCCCGGAACC
GGCCCCAAGG ACCCCGACGA CGCCGTGATC GCCGTCGTCA ACCTCGACCC GCACCACGCA
CGCGAGGCGA CGGTGCACCT GGATCTGCCG TCCATCGGCC TCACAAGGGA GGAGGAGTTC
AGGGTGACCG ACGAGCTGAC CGGCCGTTCC TACACCTGGG GTGCGGACAA CTACGTCCGT
CTCGACCCCG CGGCCGGTCC CGCGCACGTG TTCACCGTCA GCGGCAGATA G
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| Protein sequence | MIGRLPILDI SPENDLGPVK AVPGERFTVG ATVIREGHDS LAAGVVVYSP EGRREQLVPM
REHAPGTDRY EACVSLPTEG TWSFAVESWT DPFATWHHVA GVKLPLGQDT ELVLEEGARL
LARAGRRVPR RPFLNAAAKA LRDTSMTPVE RFEAALTPEV LAEMERAPLR ELVTRSKRTS
VVVHRERALF GSWYEFFPRS EGAQVDTAPG QELSGTLATA AKRLPAIADM GFDVVYLPPI
HPVGTTHRKG ANNALTAGPG DPGSVWAIGS ADGGHDAVHP DLGTLADFDA FVAEAREHGM
EIALDLALQC SPDHPWVTEH PEWFTARADG SIAYAENPPK KYQDIYPLNF DRDFEGLYAE
VLRVVEHWIA HGVRVFRVDN PHTKPVAFWQ KLLADVADRH PDVLFLAEAF TRPAMMRTLA
KVGFHQSYTY FTWRNGKDEL TDYLTELSRE SAHYLRPNLF ANTPDILHAY LQHGGRPAFA
VRAVLAALLS PTWGVYSGFE LCENTPAGPG SEEYLDSEKY QYRPRDWAAA EASGETLTGL
ITLLNRLRRE HPALRELRNL RFHHVDRPEI VCFSKHRPGT GPKDPDDAVI AVVNLDPHHA
REATVHLDLP SIGLTREEEF RVTDELTGRS YTWGADNYVR LDPAAGPAHV FTVSGR
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