Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0179 |
Symbol | |
ID | 9244010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 229268 |
End bp | 230068 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
Protein accession | YP_003678135 |
Protein GI | 297559161 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.895975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATCG CGCGGTTCGC GTCCGGTGAC GAGGTCGGGT TCGGCCTGGT AGAGAAGGAT TCCGACACCG GGGAGGAGTT CGTCGCCCGG CTGAGCGGCC ACCCCCTCAT CGGCGACATC CAGCTGACCG GCGAGCGGGC CAAGCTCTCC GACGTCCGGC TGCTGTCGCC GGTGCTGCCG ACCAAGGTGG TCTGCATCGG CAAGAACTAC GCGGACCACG TCGCGGAGAT GAAGGACGTC ACGGGGGAGT CCACCGACGA GCCCGTCGTC TTCCTCAAGC CCTCCACCGC CGTGACCGGG CCCCGCGACC CGATCTTCCG CCCCGCCGTC TCCGAGCGGG TGGACTACGA GGGCGAGCTG GCCATCGTCA TCTCCCGCCC CTGCCGCGAG GTGCCGCGCG AGCGCGCCAA GGACGTCATC TTCGGCTACA CCGTCGCCAA CGACGTCACC GCCCGCGACC TGCAGAAGAA GGACAAGCAG TGGACGCGGG CCAAGGGCTT CGACTCCTTC TGCCCCATCG GCCCCTGGAT CACCACCGGG ATGAGCATCG AGGAGGCACA GGACCTGGCC GTCACCACCA CCGTGGACGG CCAGACGCGC CAGGACGGGC GCACGTCGCA GTTCATCCAC GACATCCCGG ACATCATCGC CTACGTCACG TCCTTCATGA CGCTGCTCCC CGGTGACGTG GTCCTCACCG GAACCCCCGC CGGGGTGGGT CCGGTCGAGG TCGGCCAGGA GGTCGCGGTC ACGGTGGAGC GGTTGGGCAC GATCACCAAC CGCGTGGTGG CCCGCGACTG A
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Protein sequence | MRIARFASGD EVGFGLVEKD SDTGEEFVAR LSGHPLIGDI QLTGERAKLS DVRLLSPVLP TKVVCIGKNY ADHVAEMKDV TGESTDEPVV FLKPSTAVTG PRDPIFRPAV SERVDYEGEL AIVISRPCRE VPRERAKDVI FGYTVANDVT ARDLQKKDKQ WTRAKGFDSF CPIGPWITTG MSIEEAQDLA VTTTVDGQTR QDGRTSQFIH DIPDIIAYVT SFMTLLPGDV VLTGTPAGVG PVEVGQEVAV TVERLGTITN RVVARD
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