Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0124 |
Symbol | |
ID | 9243955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 153050 |
End bp | 153823 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003678080 |
Protein GI | 297559106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00905495 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGA CCGAGGAACC TCTTCTGCCG AGTCGCCGCA TAGCGAACGA CTTGCGCGAC TCCATCACCA GCGGTGCGCT GGAACCCGGC GAGAAGCTGC CGTCCGAACG TGAACTGGCC CAGAGGTACG GGGCAGCGCG CAATACGGCC CGAGAGGCCA TGCGCCTACT CGCTGACGAA GGGCTGGTGG ACGCCCAGCA CGGGCGGGGC GTCTTCGTGC GCGCCAAGCG GCAGCTCTTC CGGTTCGGCA GCGAGCGCTA CTCGCGACGG CTGCGCGAAG AGACCGGCCT GTCCCCCTAC CGCGCCGAAC TCGCGCGCCA GGGCATGGCC GCACGCGTTG ACTGCACCTC CATCGAGCGG GTAGACCCGC CCGGCCGAGT GAGGGAACGA CTCGGGCTTG CCGACGACGC ACAGGTGATC CGCCGGGAGA ACTGGTACTA CGCGGACGAG GCACCCGTGC AGCTCGGAAT CACCTACATC CCCGTGGAGA TTGCCGGGGA TACCGTGCTG GCCAACTCCG CCAACATGGG CAAGGGCAGT CTCTACGCGC GCTTCGAGGA GCGAGGCCAC GCGATCACTC GAGTGCGCGA GGAGATCTGC GCGCGGATGC CGACTCGGGA TGAGGTCAAA GGTCTGTCGA TCCCTGACGG TGTGCCGGTC ATCGACGTTC TCCACACGGG AATTGACCAG GAGGGCACGC CCTTCGAGGT CACCAACTTC ATCATGCGCG CGGACTTCGC AGCGTTGGAC TACAACATGC CGGTGGAGGA CTGA
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Protein sequence | MTPTEEPLLP SRRIANDLRD SITSGALEPG EKLPSERELA QRYGAARNTA REAMRLLADE GLVDAQHGRG VFVRAKRQLF RFGSERYSRR LREETGLSPY RAELARQGMA ARVDCTSIER VDPPGRVRER LGLADDAQVI RRENWYYADE APVQLGITYI PVEIAGDTVL ANSANMGKGS LYARFEERGH AITRVREEIC ARMPTRDEVK GLSIPDGVPV IDVLHTGIDQ EGTPFEVTNF IMRADFAALD YNMPVED
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