Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0040 |
Symbol | |
ID | 9243867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 51321 |
End bp | 52061 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003677998 |
Protein GI | 297559024 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0383102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0961042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCCG GGGGGCCGCT GCTGGAGGCG GCCGACCTGC ACGTGTGGAT CGAGGGCTCG CACATCCTCC AGGGCGTGTC CCTCACCGTG CCCGGCCGGG GCGTCACCGC GCTCCTGGGC CGCAACGGCG TCGGCAAGAC CACCACAGTC AAGGCGCTGC TCGGCCTGGT GCCCCGCACC GGCCGGGTGT CCTTCGACGG CGCGGACATC ACCGCCCGCC CCACGCACGC CATCGTCACC ATGGGCATCG GCTACGTGCC CGAGGAGCGC GGCGTCTTCT CCGCGCTCAC CGTCGCCGAG AACCTGCGCC TGGCCGAGCG CCGCCCCGGC CAACCGCGCT ACGGCCTCGT CCACGAGCTG TTCCCCGAAC TCCGCGAACG GGCCGACCAG CCCGCGGGCA CCCTGTCCGG CGGCCAGCAG CAGATGCTCG CCATCGGCCG CGCCCTGCTC AACGACAACA AACTCCTCAT CGTGGACGAG CCCACCAAGG GCCTCGCCCC CCGCATCGTC CGCGAGGTCG CCGACGCCGT CGCCCGCGCC GCCGAACAGG TGCCGGTCCT GCTCGTGGAG CAGAACCCGT CCCTGGTCCG GCGGGTGGCC GAACGGGCCG TGGTGCTCGA CGCGGGCCGC GTGACCCACA CCGGGCCCGC CCTGGAACTG CTCGACGACG CCGACCGCGT CCGCGAACTG CTGGGCGTCT CCCGCGCCGC CGCCGGAACC GAAGGGAGGC GGACCGCGTG A
|
Protein sequence | MSAGGPLLEA ADLHVWIEGS HILQGVSLTV PGRGVTALLG RNGVGKTTTV KALLGLVPRT GRVSFDGADI TARPTHAIVT MGIGYVPEER GVFSALTVAE NLRLAERRPG QPRYGLVHEL FPELRERADQ PAGTLSGGQQ QMLAIGRALL NDNKLLIVDE PTKGLAPRIV REVADAVARA AEQVPVLLVE QNPSLVRRVA ERAVVLDAGR VTHTGPALEL LDDADRVREL LGVSRAAAGT EGRRTA
|
| |