Gene Ndas_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0006 
Symbol 
ID9243832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp7781 
End bp9718 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content68% 
IMG OID 
ProductDNA gyrase, B subunit 
Protein accessionYP_003677965 
Protein GI297558991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0161215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCTACG ACGCAGGTTC AATCACGGTT CTGGAGGGGC TTGAGGCGGT CCGCAAGCGC 
CCCGGAATGT ACATCGGTTC CACAGGGGAG CGGGGCCTGC ACCACCTGGT CTACGAGGTG
GTCGACAACT CCGTCGACGA GGCGCTGGCG GGCCACGCCG ACGCCATCGA GGTGACCCTG
CTGGCCGACG GCGGCGTGTG CGTGGCCGAC AACGGCCGCG GCATCCCCAC CGACCTCCAC
CCGGTGGAGA AGCGCCCCGC CGTCGAGGTC GTCCTCACCA CGCTGCACGC GGGCGGCAAG
TTCGACGGCA AGTCCTACGC GGTCTCCGGC GGCCTGCACG GCGTCGGCGT CTCCGTCGTC
AACGCGCTGT CCACCGCGCT GGAGGTGGAG ATCCGCCTCC ACGGGCACGT GTGGCGCCAG
CGCTACGAGA TGACCGCGCC CACCGGCGAA CTCGTCAAGG GCGAGAGCAC CGACGAGACC
GGCACCCAGA TCACCTTCTG GCCGGACGGC GACATCTTCG AGACCACCAC GTTCTCCTTC
GAGACGCTCG CCCGCCGCAT GCAGGAGATG GCCTTCCTCA ACAAGGGGCT GTCCATCACC
ATCCGCGACG AGCGGCCCGA GCACACCGAC GGCGGACCGA CGGTCAACAC CTTCCACTAC
GACGAGGGGC TGTCGGACTA CGTCCGCCAC ATCAACGCCA AGAAGGAGCC GGCGCACGCG
TCGATCATCT CCTTCGAGGA GGAGGGCGAG GGGATCTCGG TCGAGATCGC CATGCAGTGG
AACCAGTCCT ACACCTCCTC CGTGCACACC TTCGCCAACA CCATCAACAC GGCTGAGGGC
GGCACGCACG AGGAGGGCTT CCGCTCCGCG CTGACCACCC TGGTCAACCG GTACGCCCGC
GACCAGAAGC TGCTGCGCGA GAAGGACGAC AACCTCACCG GCGACGACAT CCGCGAGGGT
CTGACCGCCA TCATCTCGGT CAAGCTGGCC GACCCGCAGT TCGAGGGCCA GACCAAGACC
AAGCTGGGCA ACACCGAGGC CAAGTCCTTC GTCCAGAAGG TCACCAACGA GCACCTGCGC
GACTGGTTCG AGCGCAACCC CGGCGAGGCC AAGGACATCG TGTCCAAGGC CAGCCAGGCC
GCCCGCGCGC GCGTGGCCGC CCGCCAGGCC CGCGACCTGA CCCGCCGCAA GACCCTTCTG
GAGACCACCT CCCTCCCGGG CAAGCTGTCG GACTGCCAGT CCACCAACCC GGAGGAGTGC
GAGGTCTACA TCGTCGAGGG CGACTCGGCC GGCGGCTCCG CCAAGGGCGG CCGCAACCCT
CACAACCAGG CCATCCTGCC CATCCGGGGC AAGATCCTCA ACGTCGAGAA GTCGCGCATC
GACCGCATCC TCAAGAACGC GGAGGTCCAG GCGATCATCA CCGCCCTGGG CACCGGCATC
CACGAGGAGT TCGACGCCGA GAAGCTGCGG TACCACAAGG TCATCCTGAT GGCCGACGCC
GACGTCGACG GCCAGCACAT CCGCACGCTG CTGCTCACCC TGCTGTTCCG CTTCATGAAG
CCGCTGGTCG AGGCCGGGAA CGTCTACCTG GCCGCGCCGC CGCTGTACAA GATCAAGTGG
GACCAGAAGG GCAGCGACGC CAGCTACGCC TTCTCCGACG CCGAGCGCGA CCGGGTCATC
GAGGCCGGGA TCGCCCAGGG CAAGAGGGAC CCGCGCCCGC GCGACATGGT GCAGCGCTTC
AAGGGTCTGG GCGAGATGAA CGCCAACGAG CTGTGGGACA CCACGATGGA CCCGGACCGC
CGCGTCCTGC TCCAGGTCAG CCTGGAGGAC GCGGCCCAGG CCGACGAACT GTTCAGCGTG
CTCATGGGTG AGGACGTCGA GTCGCGGCGC GCCTTCATCC AGCGCAACGC CAAGGACGTC
CGCTTCCTGG ACATCTAG
 
Protein sequence
MAYDAGSITV LEGLEAVRKR PGMYIGSTGE RGLHHLVYEV VDNSVDEALA GHADAIEVTL 
LADGGVCVAD NGRGIPTDLH PVEKRPAVEV VLTTLHAGGK FDGKSYAVSG GLHGVGVSVV
NALSTALEVE IRLHGHVWRQ RYEMTAPTGE LVKGESTDET GTQITFWPDG DIFETTTFSF
ETLARRMQEM AFLNKGLSIT IRDERPEHTD GGPTVNTFHY DEGLSDYVRH INAKKEPAHA
SIISFEEEGE GISVEIAMQW NQSYTSSVHT FANTINTAEG GTHEEGFRSA LTTLVNRYAR
DQKLLREKDD NLTGDDIREG LTAIISVKLA DPQFEGQTKT KLGNTEAKSF VQKVTNEHLR
DWFERNPGEA KDIVSKASQA ARARVAARQA RDLTRRKTLL ETTSLPGKLS DCQSTNPEEC
EVYIVEGDSA GGSAKGGRNP HNQAILPIRG KILNVEKSRI DRILKNAEVQ AIITALGTGI
HEEFDAEKLR YHKVILMADA DVDGQHIRTL LLTLLFRFMK PLVEAGNVYL AAPPLYKIKW
DQKGSDASYA FSDAERDRVI EAGIAQGKRD PRPRDMVQRF KGLGEMNANE LWDTTMDPDR
RVLLQVSLED AAQADELFSV LMGEDVESRR AFIQRNAKDV RFLDI