Gene Namu_5323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5323 
Symbol 
ID8450956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5954999 
End bp5956066 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content71% 
IMG OID645044356 
ProductABC transporter related 
Protein accessionYP_003204578 
Protein GI258655422 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG CAGTAGGCCT GACGAAGCGA TACGGCAGCA CGGTGGCCGT CGACGACCTG 
TCGTTCACCG TGCAGTCGGG CATGGTGACC GGATTCCTGG GACCCAACGG CGCGGGCAAG
TCCACCACCA TGCGGATGAT CCTGGGTCTG GACAACCCGA ACGGCGGGCG GGCGCTGATC
GACGGCCAGC CCTACGCCGC GCTGACCCGG CCGTTGACGC AGGTCGGCGC GCTGCTGGAC
GCGAACTGGG TGCACCCCAA CCGGTCCGCG CGCTCGCACC TGCGCTTCAT GGCCGCGTCC
AACAAGATCC CGGCCCGCCG GGTGGACGAG GTGCTCGAGC TGGTCGGGCT GACCAGCGTC
GGCAAGAAGG CCGTCGGCAA GTTCTCGCTG GGCATGAAGC AGCGGCTCGG CCTGGCCGGT
GCCCTGCTGG GCGATCCGAA GGTGCTGCTG TTCGACGAGC CGGTCAACGG ACTGGATCCG
GAGGGCATCT ACTGGATCCG CACCTTCATG AAGAATCTGG CCGCCCAGGG CCGGACCGTC
TTCGTCTCCT CGCACCTGCT CTCGGAGATG GCGCTCACCG CCGACCACCT GATCGTCATC
GGCCGGGGCC GGCTGATCGC CGACGCGGCG ACCAAGGACT TCATCGCCCA GGCGACCCGC
TCCTCGATCC GGGTCCGCTC GCCGCAGCTG GCCGACCTGC GCGCCGCCCT GGTCACGGCG
AATCTGACCG TCAACGACGT CGACGGGGCG CTGGAGGTCG TCGGCGCGCC GATCGAACAG
GTCGGCGACG TGGCCGGCGC GGCCGGGATC ACCCTGCACG AGCTCACCCC GCAGGTGGGC
TCGCTGGAAG AGGCGTTCAT CCAGCTCACC GGTGACGCCG TCGAGTACGG CGGTTCCCGC
GCCCATGGAG CGGGATCGGC CCCGATCAGC ACGGTCGGTG CGGCCGGAGC GCCGCCGCCC
GGCTTTCCCC CACCGGGGGT GCCGGCCGGC TACCCGCCAC CCGGCCCGCC GGGGTTCGCC
GCCCCGGCCC CGTCCCCCGT TCCGCCGCGG GAAGGTGAAT CCCGGTGA
 
Protein sequence
MIEAVGLTKR YGSTVAVDDL SFTVQSGMVT GFLGPNGAGK STTMRMILGL DNPNGGRALI 
DGQPYAALTR PLTQVGALLD ANWVHPNRSA RSHLRFMAAS NKIPARRVDE VLELVGLTSV
GKKAVGKFSL GMKQRLGLAG ALLGDPKVLL FDEPVNGLDP EGIYWIRTFM KNLAAQGRTV
FVSSHLLSEM ALTADHLIVI GRGRLIADAA TKDFIAQATR SSIRVRSPQL ADLRAALVTA
NLTVNDVDGA LEVVGAPIEQ VGDVAGAAGI TLHELTPQVG SLEEAFIQLT GDAVEYGGSR
AHGAGSAPIS TVGAAGAPPP GFPPPGVPAG YPPPGPPGFA APAPSPVPPR EGESR