Gene Namu_5287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5287 
Symbol 
ID8450920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5904829 
End bp5907243 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content70% 
IMG OID645044320 
Productcarbon-monoxide dehydrogenase, large subunit 
Protein accessionYP_003204542 
Protein GI258655386 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID[TIGR02416] carbon-monoxide dehydrogenase, large subunit 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA CCGCCGACGC CCCCAGCGTG CCGCGCAGCG CGGCCGGCAA TCCGATCGGC 
TTCGGCCGGA TGCCGCGCAA GGAGGACGCC CGGTTCCTGC GCGGGCAGGG CCACTACGTC
GACGACGTGC GCATGCCCGG CATGCTCGAA TCGGCCATCC TGCGCAGCCC GTACGCACAC
GCCCGCATCC GCTCCATCGA CACCACCGCC GCGGCAGCGC TGCCCGGGGT GCACGCGGTG
ATCACCGGGC AGACCCTGGC CGGATTGAAC CTGGCCTGGA TGCCGACGCT GTCCGCGGAC
GTGCAGGCCG TGCTGGCCAC CGACAAGGTG CGCTTCCAGC ATCAGGAGGT GGCCTACGTC
GTCGCCGACA CCGAGTACAT CGCCCGGGAC GCGCTGGAGC TGATCGAGGT CGACTACGAG
CCGCTGCCGG CCGTCGTCGA CGCCAAGCGG GCCCTGGACC CGGACGCGCC CGTCATCCGC
GACGACGTCG ACGGTCGCAC GGACAACCAC ATCTTCGACT GGGAGGCCGG CGACGCCGCC
GAGACCGCGC GGGTGTTCGA CGCCGCGGAG GTGGTCGTCA CCCAGGAGAT GCTCTATCCC
CGAGTGCATC CCGCACCGAT GGAGACCTGC GGGACGGTCG CCCACATGGA CCCGGTCACC
GGCAAGCTCA CCGTCTACTC GACCAACCAG GCGCCGCACG CGCACCGGAC CATCTACGCG
CTGGTCGCCG GCATCCCCGA GCACAAGATC CGGATCATCT CGCCGGACAT CGGCGGGGGC
TTCGGCAACA AGGTCGGCAT CTACCCCGGG TACGTGCTGG CCGTCGTCGG GTCGATCGTC
ACCGGCCGGC CGGTCAAATG GATGGAGGAC CGCAGCGAGA ACCTGATGGC CACGTCGTTC
GCCCGGGACT ACCACATGAC GGGCAGCATC GCGTCGACCC GGGACGGCAA GATCACCGGC
CTCAAGGTCG ACGTGCTGGC CGACCACGGG GCGTTCAACG GGACCGCCCA GCCGACCAAG
TTTCCGGCCG GCTTTTTCCA CATCTTCACC GGCTCGTACG ACCTGCAGGC CGCGCACTGC
AAGGTCTCCG GCGTCTACAC CAACAAGGCC CCGGGCGGGG TGGCCTACGC CTGCTCGTTC
CGGATCACCG AGGCGGTGTA CCTGGTCGAG CGGATGGTCG ACCTGCTCGC CCGCGAATTG
GACATGGACC CGGCGCAGCT GCGGCTGAAG AACCTGCTGC GGCCAGAGCA GTTCCCGTAC
ACGTCCAAGA CCGGCTGGGA GTACGACTCC GGTGAGTACC CGCGGGCGTT GAAGCTGGCC
ATGCAGATCG CCGGGTACGA CGAGCTGCGC AAGGAACAAG CCGAGAAGCG GGCCCGCGGC
GAGCTGATGG GCATCGGCAT CTCGTTCTTC ACCGAGGGGG TCGGGGCCGG ACCCAAGAAG
CACATGGACA TCCTCGGCCT GGGCATGGCC GACGGCTGCG AACTGCGGGT CCACCCGACC
GGCACCGCGC AGCTGCGGCT CTCGGTGCAG AGCCAGGGAC AGGGGCACGA GACGACCTAC
GCGCAGATCG TCGCGCAGGA GCTCGGGCTG CCCCCCGAGG ACGTCGAGGT CATCCACGGC
GACACCGACA ACACCCCGTT CGGCCTGGGC ACCTACGGCT CCCGGTCGAC CCCGGTCTCG
GGTGCGGCGG CGGCCATTGT CGCCCAACGC ATCCGGACCA AGGCGCGGAT CGTCGCGGCG
GCGGCGCTGG AGGTTAGCGC GGACGACCTG GAGTGGCAGA TCACCGCCGC GGGCGGCCGG
TGGCAGGTCA AGGGCGACCC GGAGCAGGGC AAGACGATCG CCGAGATCGC CATGCTCAGC
CACGGGACCC TGGAACTGCC CGAGGGGGTC GAGGGGCACC TGGATGCCTC CGTCGTCTAC
GACCCGCCGA ACCTGACCTA CCCGTTCGGC GCGTACATCT GCGTCACCGA CGTCGACCCG
GGGACCGGCC AGGTCAAGGT GCGCCGGTTC ATCGCCGTGG ACGACTGCGG CCCGCGGATC
AACCCGATGA TCGTGGAGGG GCAGGTGCAC GGCGGCCTGG CCGACGGGAT CGGGATGGCG
CTGATGCAGC TCATCGCGTT CGACGCCGAC GGCAACTGCG TCGGTGGTTC GTTCATGGAC
TACCTGCTGC CGACGGCGCT GGAGTGTCCG AGCTACGAGC TGGGCGAAAC GGTGACACCC
TCACCGCACC ACCCGCTGGG CCTCAAGGGG GTCGGCGAGT CCGCGACCGT CGGGTCGCCG
CCGGCCGTGG TGAACTCGGT GCTGGACGCG ATCGCGCCGT TCGGGGTGCG GCACGCCGAC
ATGCCCCTGA CCCCGGCCAA TGTCTGGATG GCCATGCAGG GCACCCCGAT GCGCACCGAC
CTGGCCGTGA CCTGA
 
Protein sequence
MTTTADAPSV PRSAAGNPIG FGRMPRKEDA RFLRGQGHYV DDVRMPGMLE SAILRSPYAH 
ARIRSIDTTA AAALPGVHAV ITGQTLAGLN LAWMPTLSAD VQAVLATDKV RFQHQEVAYV
VADTEYIARD ALELIEVDYE PLPAVVDAKR ALDPDAPVIR DDVDGRTDNH IFDWEAGDAA
ETARVFDAAE VVVTQEMLYP RVHPAPMETC GTVAHMDPVT GKLTVYSTNQ APHAHRTIYA
LVAGIPEHKI RIISPDIGGG FGNKVGIYPG YVLAVVGSIV TGRPVKWMED RSENLMATSF
ARDYHMTGSI ASTRDGKITG LKVDVLADHG AFNGTAQPTK FPAGFFHIFT GSYDLQAAHC
KVSGVYTNKA PGGVAYACSF RITEAVYLVE RMVDLLAREL DMDPAQLRLK NLLRPEQFPY
TSKTGWEYDS GEYPRALKLA MQIAGYDELR KEQAEKRARG ELMGIGISFF TEGVGAGPKK
HMDILGLGMA DGCELRVHPT GTAQLRLSVQ SQGQGHETTY AQIVAQELGL PPEDVEVIHG
DTDNTPFGLG TYGSRSTPVS GAAAAIVAQR IRTKARIVAA AALEVSADDL EWQITAAGGR
WQVKGDPEQG KTIAEIAMLS HGTLELPEGV EGHLDASVVY DPPNLTYPFG AYICVTDVDP
GTGQVKVRRF IAVDDCGPRI NPMIVEGQVH GGLADGIGMA LMQLIAFDAD GNCVGGSFMD
YLLPTALECP SYELGETVTP SPHHPLGLKG VGESATVGSP PAVVNSVLDA IAPFGVRHAD
MPLTPANVWM AMQGTPMRTD LAVT