Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5268 |
Symbol | |
ID | 8450899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5882822 |
End bp | 5884315 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645044299 |
Product | alpha amylase catalytic region |
Protein accession | YP_003204523 |
Protein GI | 258655367 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCC GGCTGAGCAG CGCCACGCAT CCGGTGATCG TTGAGATCAA CACCTGGCCG TGGCTGAACC GGCTGAGCCG GCTGAGGCGG GGGGCCGGGG CGCCGATCGA GCTGGGCACG GTCCCTGACC AGGCCTGGGA CGAGCTGGCC GCACCCGGTG TCGACGCCGT CTGGCTGATG GGCGTGTGGC GGCGCAGCCC GGCCGGGGTG GCGATCGCGC TGGCCAACCC CGACCTGACC GCGTCCTTCG GCGCCGCGCT GCCGGACTGG ACACCCGCCG ACGTCGCCGG GTCGCCGTAC TGCATCCGTG AGTACGTCGT CGACGAGCAG CTGGGCGGGC CGGCCGGGCT GGCCGCCGCC CGCGCCGCGC TGGCCGACCG CGGCGTCGGC CTGATCCTGG ATTTCGTGCC CAACCACGTC GCACCGGACC ACCCCTGGGT GACCGGCCGG CCCGAGCTGT TCGTCGCCGG CACCGACGCC GACCTCGAGC GGGACCCGGC CGCGTTCGTC CGGGTGGGCC AGCGCGTCCT GGCCAACGGG CGCGACCCCT ACTTCCCGGC CTGGCCGGAC GTCGTGCAGC TCGACGCCTT CGCGCCCGCG TTGCGGGCCA CCGTCATCGA CACCCTGGAC GCGATCGCCG CGCAGTGCGA CGGGGTGCGC TGCGACATGG CGATGCTGAT GATGAACGAG ATCTTCGCCC GCACCTGGGG CGAGCGGGTC GGGCCGGCGC CGGCGGCCGA CTACTGGCCG ACCGTCATCC CGGCCGTGCG GGAGCGTCAT CCCGGATTCC GATTCCTGGC CGAGGCCTAC TGGGACACCG AGTGGGCGCT GCAGCAGCAG GGTTTCGACT TCTGCTACGA CAAACGACTC TACGACCGGC TGGTGCACGG GCCGGCCGAG CAGGTGCGGG CCCACCTGAG CGCCGACCTG GACTACCAGA ACAAGCTGGT CCGGTTCGTG GAGAACCACG ACGAGCCGCG GGCCGCCGCC GTGTTCGGGG ACGAGCGGGC GCCGGTGACG GCGGTGGCCG CGCTGACCCA GGCCGGGGCG CGGCTGATCC ACGACGGGCA GGCGCAGGGC TGGCGCACCC AGCTGCCGGT GTTCCTGGGT CGCTACCCCG ACGAACCCAC CGACGAGGGG TTGGCTGCGT CCGCGCGGGC CCTGCTCGAG GTGCTGGCCG ATCCGACGTT CCACACCGGC CGGTGGCGGC TGGCCGAGCG TGCCGGCTGG CCCGGCTCCG GCTTTGAGAA CCTGGTCGCC TGGTGCTGGG AGGGCCCCAC CCGCTGGCTG GTCGTGGTCA ACCTGAGCGG GCTGGCCGTC ACCGGGCGGG TCCGGTTGCC CCTGGACGGC CTGGGCGGCC ACATGTGGCG GCTGGTCGAC CCGACCCACG ACGTGACCTA CGAGCGCAAC GGGCACGACC TGGTGGACGG GCTGTTCGTC CGGCTCGGCC CGTGGGACTG GCACCTGCTT CGTATCGACC GGTCCCACGG CTGA
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Protein sequence | MSTRLSSATH PVIVEINTWP WLNRLSRLRR GAGAPIELGT VPDQAWDELA APGVDAVWLM GVWRRSPAGV AIALANPDLT ASFGAALPDW TPADVAGSPY CIREYVVDEQ LGGPAGLAAA RAALADRGVG LILDFVPNHV APDHPWVTGR PELFVAGTDA DLERDPAAFV RVGQRVLANG RDPYFPAWPD VVQLDAFAPA LRATVIDTLD AIAAQCDGVR CDMAMLMMNE IFARTWGERV GPAPAADYWP TVIPAVRERH PGFRFLAEAY WDTEWALQQQ GFDFCYDKRL YDRLVHGPAE QVRAHLSADL DYQNKLVRFV ENHDEPRAAA VFGDERAPVT AVAALTQAGA RLIHDGQAQG WRTQLPVFLG RYPDEPTDEG LAASARALLE VLADPTFHTG RWRLAERAGW PGSGFENLVA WCWEGPTRWL VVVNLSGLAV TGRVRLPLDG LGGHMWRLVD PTHDVTYERN GHDLVDGLFV RLGPWDWHLL RIDRSHG
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