Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5259 |
Symbol | |
ID | 8450890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5870773 |
End bp | 5871606 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645044290 |
Product | ABC-2 type transporter |
Protein accession | YP_003204514 |
Protein GI | 258655358 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 77 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCA CCACGACCAC CACGACCGGC CACCGCGCGG CCGGCCCCGC CCCCCAGCAG ACCCCGACCG CGACCGCCGC CGCCTACCCG CGGCACGTCG TCGCCCTGGC CAAGCGCAGC CTGATCAAGA TGTGGCGCAC CCCGGAGGCG CTGATCGACG TCACCCTGCA GCCGATCATC TTCCTGCTGA TGTTCACCTA CATCTTCGGT GGGGCGATCG CCGGCAGCTC CGCGGACTAC CTGCAGTTCC TGCTGCCCGG TCTGCTCGGC CAGACCATCG CCATGGCCGG CGTCGCGCTC GGTCAGAACC TGAACGCGGA CATCGAGAAG GGTGTGTTCG ACCGGTTCCG GTCGCTGCCG ATCGGCCGCT CGGTGCCGCT GGTCGGCGCC GTCTTCGCCG ACATCGCCCG CTACTTCATC CTGTGCGTGG TCACCCTGGG CTTCGGCATG ATCATGGGCT TTCGCATCGA GACCAACCCG ATGGCCGCGC TGGCCGCCGT CGGCATCTCG ATCGCGTTCG CGCTGTGCTT CTGCTGGATC TCGGTGTTCG TCGGCATGAA GGCCCGCACC TCCGGTGCGG TGCAGGGCGT GATGTTCCTG ATCGTGCTGC CGCTCTCGTT CGCCAGCAAC ACCTACGTGC CGACCTCGAC CATGCCGAGC TGGCTGGAGA CGTTCGCCAA TGCCAACCCG ATCTCGCAGC TGGTCACCAC GGTGCGCGGG CTGATGATCG GCGGCCCGGT GGCGACCAGC CTGATGTGGA CGCTGGTCTG GATGGCCATC CTGCTGATCG TGTTCGTCCC GCTCGCGCTG CGCGGCTACC GCCGGCGGGT CTGA
|
Protein sequence | MSTTTTTTTG HRAAGPAPQQ TPTATAAAYP RHVVALAKRS LIKMWRTPEA LIDVTLQPII FLLMFTYIFG GAIAGSSADY LQFLLPGLLG QTIAMAGVAL GQNLNADIEK GVFDRFRSLP IGRSVPLVGA VFADIARYFI LCVVTLGFGM IMGFRIETNP MAALAAVGIS IAFALCFCWI SVFVGMKART SGAVQGVMFL IVLPLSFASN TYVPTSTMPS WLETFANANP ISQLVTTVRG LMIGGPVATS LMWTLVWMAI LLIVFVPLAL RGYRRRV
|
| |