Gene Namu_5258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5258 
Symbol 
ID8450889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5869784 
End bp5870776 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content72% 
IMG OID645044289 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_003204513 
Protein GI258655357 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACA TCATTGAGGC CGAGGGCCTG CGCAAGGCGT TCGGCAAGAC CCAGGCGCTG 
GACGGGGTCG ACCTGGCCGC CCGGGAGGGC ACCGTGCTCG GGGTGTTGGG TCCCAACGGG
GCCGGCAAGA CCACCGCGGT GCGCGTGCTG GCGACCCTGC TGCGGGCGGA CGCCGGCACC
GCCCGCATCG ACGGGTACGA CGTGGTCAAG CAGGCCGCCC AGGTGCGCCG CACCATCGGC
CTGACCGGCC AGTACGCCTC CGTCGACGAG GACCTCACGG GCGTGCAGAA CCTGGTCATG
ATCGGCACCC TGCTCAACCT CTCGGCCCGC GACGCCAGGT CGCGCGCGCT GGAGCTGCTC
GACTGGTTCG GCCTGGCCGA CGCGGCCGGG CGGCGGGCCA AGACCTACTC GGGCGGGATG
CGCCGGCGGC TGGATCTGGC CGCCAGCCTG GTCGGCCGGC CGCGGGTGAT CTTCCTGGAC
GAGCCGACCA CCGGGCTCGA TCCGGCCAAG CGCGAGGACA TGTGGGACGT GGTGCGGCGG
CTGGTGGCCG ACGGCTCGAC CGTCCTGCTG ACCACCCAGT ACCTGGAGGA GGCCGACGCG
CTGGCCGACG AGATCACGGT GATCGACCAC GGCCGGGTCA TCGCCCACGA CACCCCGGAG
GGCCTCAAGC GGACCATCGG CGGTCAGCGC ATCCGGGTCA AACCCAGCGA CAAGGATCGG
CTGCCCGACG TCGGCCGGAT CCTGGCCGAG ATCTCCGGCG GCCAACCCCA GCCAACCGGT
CGGGACGAGC TGACCGCGGC CGTCGACACC GGCGAGGACG CTCTGGCCCG CACGGTCGGC
CGGCTGGCCG CCGAGGGCAT CGGCGTCACC GAACTGTCCC TACACCTGCC GTCCCTGGAC
GAGGTGTTCC TGACCCTGAC CGGCCAACGC GTCGGCGACA ACTCCACCGG GCCCTCCGGT
CCCACCGTCA CGACCTCGAA GGACGCGGCA TGA
 
Protein sequence
MTHIIEAEGL RKAFGKTQAL DGVDLAAREG TVLGVLGPNG AGKTTAVRVL ATLLRADAGT 
ARIDGYDVVK QAAQVRRTIG LTGQYASVDE DLTGVQNLVM IGTLLNLSAR DARSRALELL
DWFGLADAAG RRAKTYSGGM RRRLDLAASL VGRPRVIFLD EPTTGLDPAK REDMWDVVRR
LVADGSTVLL TTQYLEEADA LADEITVIDH GRVIAHDTPE GLKRTIGGQR IRVKPSDKDR
LPDVGRILAE ISGGQPQPTG RDELTAAVDT GEDALARTVG RLAAEGIGVT ELSLHLPSLD
EVFLTLTGQR VGDNSTGPSG PTVTTSKDAA