Gene Namu_5218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5218 
Symbol 
ID8450849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5818251 
End bp5820101 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content67% 
IMG OID645044249 
Productchaperone protein DnaK 
Protein accessionYP_003204473 
Protein GI258655317 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTG CCGTCGGTAT CGATCTCGGT ACCACCAACT CGGTCGTTGC TGTCCTGGAG 
GGCGGCGAGC CGACCGTCAT CGCTAATGCC GAGGGCGCCC GGACGACGCC GTCGATCGTG
GCCTTCGCCA AGAACGGCGA GGTGCTGGTC GGTGAGGTCG CCAAGCGCCA GGCCGTGACC
AACGTCGACC GCACCATCCG GTCGGTCAAG CGCCACATGG GCACCACCTG GAAGTCGCCG
GACGTCGACG GCAAGACCTA CACCGCGCAG GAGATCAGCG CCCGGGTGCT GGGCAAGCTC
AAGCGCGACG CCGAGTCCTA CCTGGGTGAG AACGTCGTCG ACGCGGTGAT CACCGTGCCC
GCGTACTTCA ACGACTCGCA GCGCCAGGCG ACCAAGGAGG CCGGCGAGAT CGCCGGCCTG
AACGTCCTGC GCATCGTCAA CGAGCCGACC GCCGCGGCCC TGGCCTACGG CCTGGACAAG
GGCGAGAAGG AGCAGACCAT CCTGGTCTTC GACCTCGGTG GTGGCACCTT CGACGTCTCG
CTGCTGGAGA TCGGTGACGG CGTCGTCGAG GTGAAGGCGA CTGCGGGCGA CAACAAGCTC
GGCGGCGACG ACTGGGACGA GCGCGTCGTC AAGTGGCTGG TCGACAAGTT CAAGGCCGCC
CACGGCATCG ACCTGACCCG CGACAAGATG GCCATGCAGC GCATCCGCGA GGCCTCCGAG
AAGGCCAAGA TCGAGCTGTC CAGCTCGCAG CAGACCTCCA TCAACCTGCC GTACATCACG
GTGGATGCGG AGAAGAACCC GCTGTTCCTG GACGAGACGC TCTCCCGCGC CGAGTTCCAG
AAGATCACCT CCGATCTGCT GGACCGCACC CGCAACCCGT TCCACCAGGT GATCAAGGAC
GCCGGCGTCA AGGTCGGCGA CATCGACCAC GTGGTCATGG TCGGCGGGTC CACCCGGATG
CCGGCCGTCA CCGAGCTGGT CAAGGAGCTG ACCGGTGGCA AGGAGCCGAA CAAGGGTGTG
AACCCGGACG AGGTCGTCGC CGTCGGCGCG GCCCTGCAGG CCGGCGTGCT GCGCGGCGAG
GTCAAGGACG TGCTGCTGCT GGACGTCACC CCACTGTCCC TGGGCATCGA GACCAAGGGC
GGCATCATGA CCAAGCTGAT CGAGCGCAAC ACCACGATCC CGACCAAGCG GTCCGAGATC
TTCACCACGG CCGAGGACAA CCAGCCGTCG GTGCAGATCC AGGTCTATCA GGGTGAGCGC
GAGATCGCGG CCTACAACAA GCGTCTGGGC ATGTTCGAGC TGACCGGCCT GCCGCCGGCC
CCGCGCAACG TGCCGCAGAT CGAGGTCACC TTCGACATCG ACGCCAACGG CATCGTGCAC
GTGTCGGCCA AGGACATGGG CACCGGCAAG ACCCAGTCGA TGACGATCAC CGGCGGCTCC
GCGCTGCCCA AGGACGACAT CGACCGGATG ATGCGCGAGG CCGAGGCGCA CGCCGAGGAC
GACAAGGCCC GCCGCGAGGA GGCCGAGGTC CGCAACCAGG CCGAGGCGCT GGTCTACCAG
ACCGAGAAGT TCCTCAAGGA CAACGACGAG AAGCTGCCCG AGGACCCCAA GGAGCGGGTC
AAGGGCTGCA TCACCAAGGT GAACGAGGCG CTCAAGGGCA CCGACGTCGC CGCGATCAAG
TCCGCCGTCG AGGAGCTGGC CAACGAGTCG CAGCAGCTGG GTTCGGCGCT GTACGCGCAG
ACCCAGGCCG ATGCGGCCAG CGGCTCCGCC GACCCGGGTG CCGGCTCGTC CTCGCAGCCG
GAGGAGGAGA TCGTCGACGC CGAGATCGTG GACGAGGGCG ACAAGAAGTG A
 
Protein sequence
MSRAVGIDLG TTNSVVAVLE GGEPTVIANA EGARTTPSIV AFAKNGEVLV GEVAKRQAVT 
NVDRTIRSVK RHMGTTWKSP DVDGKTYTAQ EISARVLGKL KRDAESYLGE NVVDAVITVP
AYFNDSQRQA TKEAGEIAGL NVLRIVNEPT AAALAYGLDK GEKEQTILVF DLGGGTFDVS
LLEIGDGVVE VKATAGDNKL GGDDWDERVV KWLVDKFKAA HGIDLTRDKM AMQRIREASE
KAKIELSSSQ QTSINLPYIT VDAEKNPLFL DETLSRAEFQ KITSDLLDRT RNPFHQVIKD
AGVKVGDIDH VVMVGGSTRM PAVTELVKEL TGGKEPNKGV NPDEVVAVGA ALQAGVLRGE
VKDVLLLDVT PLSLGIETKG GIMTKLIERN TTIPTKRSEI FTTAEDNQPS VQIQVYQGER
EIAAYNKRLG MFELTGLPPA PRNVPQIEVT FDIDANGIVH VSAKDMGTGK TQSMTITGGS
ALPKDDIDRM MREAEAHAED DKARREEAEV RNQAEALVYQ TEKFLKDNDE KLPEDPKERV
KGCITKVNEA LKGTDVAAIK SAVEELANES QQLGSALYAQ TQADAASGSA DPGAGSSSQP
EEEIVDAEIV DEGDKK