Gene Namu_5176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5176 
Symbol 
ID8450807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5768131 
End bp5768871 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content73% 
IMG OID645044210 
ProductABC transporter related 
Protein accessionYP_003204434 
Protein GI258655278 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones81 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC CGGCCGGGAC GCTGCAGGTC CGGGAGCTGG CCTTCGCCTA TCCGGACGGC 
CGGCAGGCGC TGTTCGGGGT CAACCTGGAC GTCGCCGCGG GGGAGCGGGT GGCCATCCTC
GGGCCCAATG GGGCCGGCAA GACGACCCTG GTGCTGCACC TGAACGGCAC GCTGACCGCG
GGGGCCGGCT CGGTGACCGT GGACGGCCTG AGCGTCGGCA AGCCGACGCT GCGGGAAATC
CGGCGCCGGG TCGGCATCGT CTTCCAGGAC CCCGACGACC AGCTGTTCAT GCCCACCGTG
CGCGACGACG TGGCCTTCGG CCCGATCAAC CTGGGCTACC GGGACGCCGA GCTGGCCGCT
CGGGTCGACC GGGCGCTCGC CCTGACCGGC ATGAGCGGCG CGGCCGACCG GGCGCCGCAC
CATCTGAGCT TCGGCCAGCG ACGCCGGGTG GCGGCCAGCA CGGTGCTCTC GATGGACCCG
TCGATCCTGG TGCTCGACGA GCCCTCGTCC AACCTGGATC CGGTGGCCCG CCGCGAGTTC
GCCGACATCG TGCTCTCGCT CGGGCTGACC ACGCTGATCG TCACCCACGA CCTGCTCTAC
GCGCTGCAGC TGTGCCCGCG CTCGGTGATC ATGGACGGCG GCCGGATCGT CGCCGACGGG
CCCACCGAGC AGATCCTGGG CGACGCCGAG CTGCTGGCCG CGCACCGGCT CGAGCTGCCC
TACGGCTACG TCCTGCCCTG A
 
Protein sequence
MSGPAGTLQV RELAFAYPDG RQALFGVNLD VAAGERVAIL GPNGAGKTTL VLHLNGTLTA 
GAGSVTVDGL SVGKPTLREI RRRVGIVFQD PDDQLFMPTV RDDVAFGPIN LGYRDAELAA
RVDRALALTG MSGAADRAPH HLSFGQRRRV AASTVLSMDP SILVLDEPSS NLDPVARREF
ADIVLSLGLT TLIVTHDLLY ALQLCPRSVI MDGGRIVADG PTEQILGDAE LLAAHRLELP
YGYVLP