Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5166 |
Symbol | |
ID | 8450797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5752203 |
End bp | 5754377 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645044200 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_003204424 |
Protein GI | 258655268 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC CGGACAGTTT CGCCGACCTG CCGCTGCGGG ACCCGTCGGC CCCGGCCCCG GTCTCTGGGC CGGCCCCGGC CGAGGCAGCC GGATCCTGGC TGTCTCCCGA GGGCATCGCG ATCAAGACCC GGTACACCGC CGCGGATCTG GCTGGCCTGG ACGCGCTGGA CACCTACCCG GGGCTGCCCC CGTTCCTGCG CGGCCCGTAC CCGACGATGT ACACCACCCA GCCGTGGACC ATCCGCCAGT ACGCGGGCTT TTCCACCGCC GCCGAGTCCA ACGCGTTCTA CCGGCGCAAC CTGGCCGCCG GGCAGAAGGG CCTGTCGGTC GCGTTCGACC TGGCCACCCA CCGCGGCTAC GACTCGGACC ATCCCCGGGT CGCCGGTGAC GTCGGGATGG CCGGCGTGGC CATCGATTCG ATCTACGACA TGCGGCAGCT GTTCGATCAC ATCCCGCTGG GTTCGATCAG CGTGTCCATG ACGATGAACG GCGCGGTGCT GCCGGTGCTG GCGCTGTACA TCGTGGCCGC CGAGGAACAG GGGGTGCCGC CGGAGCAACT GGCCGGGACC ATCCAGAACG ACATCCTCAA GGAGTTCATG GTCCGCAACA CCTACATCTA CCCGCCGGCC GCGTCGATGC GGATCATCTC CGACATCTTC ACCTACACCG CGGCGAAGAT GCCCAAGTTC AACTCGATCT CGATCTCCGG CTACCACATG CAGGAGGCCG GCGCGACGGC CGACCTGGAG CTGGCCTACA CGCTGGCCGA CGGCCTGGAG TACCTGCGGA CCGGGGTGGC CGCCGGGTTG GACGTGGACC GCTTCGCCCC GCGGCTGAGC TTCTTCTGGG CGATCGGCAT GAACTTCTTC ATGGAGATCG CCAAGATGCG GGCGGCTCGG GCGATCTGGT GCCAACTGGT CGCCGGGCTC GGCGCGAAGA ACCCGAAATC GCTGCCCCTG CGCACCCATT CGCAGACCTC CGGCTGGTCG CTGACCGCCC AGGACCCGTT CAACAACGTG GCCCGCACCT GCATCGAGGC GATGGCCGCG ACCCAGGGCC ACACCCAGTC GCTGCACACC AACGCGCTGG ACGAGGCGAT CGCGCTGCCC ACCGACTTCT CCGCCCGGAT CGCCCGCAAC ACCCAGCTGC TGCTGCAGCA GGAATCCGGC ACCACCGCCA CGATCGATCC GTGGGGCGGC TCGTACTACG TGGAGAAGCT GACCCACGAC CTGGCCGACC GGGCCTGGCA GCACATCCGC GAGGTCGAGG ACGCCGGCGG CATGGCCAAG GCGATCGAGG CCGGCATCCC CAAGCTGCGG ATCGAGGAGG CCGCCGCCCG CACCCAGGCC CGGATCGACT CGGGTCACCA GGCGGTCATC GGCGTCAACC GCTACCGGGT GGACGACCAG CCGCCACTGG ACGTGCTCAG GGTGGACAAC ACCGCCGTCC GCGCCGCCCA GATCGAGCAA CTGCGCCGGT TGCGGGCCGA GCGGGACGAG CCGGCCGTGA CCGCAGCGCT GGCGGCGCTG ACCAACGCCG CCGGGGCCGA ACCGGTGCGC GGCGACCTGG CCCACAACCT GCTCGCGCTG GCCGTCGACG CGGCCCGGGC CAAGGCCACC GTCGGGGAGA TCTCCGCGGC GCTGGAGCAG GTCTGGGGCC GGCACACCGC CCACATCCGT ACGATCACCG GCGTGTACCG GGCCGAGGCG GGTGACTCAC CCTTGGTCGC GCAGGTGCTC GCGGCGACCG AGCGATTCGC GCAGGCCGAG GGGCGGCGGC CGCGCATCCT GGTCGCCAAG ATGGGGCAGG ACGGCCACGA CCGCGGGCAG AAGGTGATCG TCTCGGCCTT CTCCGACCTG GGGTTCGACG TCGACGTCGG CCCGCTGTTC TCCACGCCGG CCGAGGTCGC GCAGCAGGCT GTCGACAACG ACGTGCACGT GGTCGGGGTC AACTCGCTGG CCGCCGGCCA CCTGACCCTG GTCCCGGCCC TGCGGGACGC GCTGGCCGAG CTGGGCCGGC CCGACATCAT GATCGTGGTG GGCGGCGTCA TCCCCCCGGC CGACGTGCCC ACGTTGCGGG AGATGGGCGC GGCGGCGGTG TTCGGCCCCG GCACGGTCAT CGCCGAGGCC GCGCTCGACC TGTTGGATCA ACTCTCGACG GCGCTGGCGC ACTGA
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Protein sequence | MSVPDSFADL PLRDPSAPAP VSGPAPAEAA GSWLSPEGIA IKTRYTAADL AGLDALDTYP GLPPFLRGPY PTMYTTQPWT IRQYAGFSTA AESNAFYRRN LAAGQKGLSV AFDLATHRGY DSDHPRVAGD VGMAGVAIDS IYDMRQLFDH IPLGSISVSM TMNGAVLPVL ALYIVAAEEQ GVPPEQLAGT IQNDILKEFM VRNTYIYPPA ASMRIISDIF TYTAAKMPKF NSISISGYHM QEAGATADLE LAYTLADGLE YLRTGVAAGL DVDRFAPRLS FFWAIGMNFF MEIAKMRAAR AIWCQLVAGL GAKNPKSLPL RTHSQTSGWS LTAQDPFNNV ARTCIEAMAA TQGHTQSLHT NALDEAIALP TDFSARIARN TQLLLQQESG TTATIDPWGG SYYVEKLTHD LADRAWQHIR EVEDAGGMAK AIEAGIPKLR IEEAAARTQA RIDSGHQAVI GVNRYRVDDQ PPLDVLRVDN TAVRAAQIEQ LRRLRAERDE PAVTAALAAL TNAAGAEPVR GDLAHNLLAL AVDAARAKAT VGEISAALEQ VWGRHTAHIR TITGVYRAEA GDSPLVAQVL AATERFAQAE GRRPRILVAK MGQDGHDRGQ KVIVSAFSDL GFDVDVGPLF STPAEVAQQA VDNDVHVVGV NSLAAGHLTL VPALRDALAE LGRPDIMIVV GGVIPPADVP TLREMGAAAV FGPGTVIAEA ALDLLDQLST ALAH
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