| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4926 |
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| Symbol | |
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| ID | 8450557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5500032 |
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| End bp | 5501768 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645043965 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003204189 |
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| Protein GI | 258655033 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCG TGAGTCGTGC ATCCGGTCCC GATTGGTGGA AACGGGCCGT CGTCTACCAG
ATCTATCCGC GCAGTTTCGC CGATTCCGAC GGGGACGGAA TCGGCGATCT GCGGGGGATC
ATCTCCCGGC TGGACCATCT GGCCCGGCTG GGCGTGGACG TTATCTGGCT CTCGCCGGTC
TATCCCTCGC CGCAGGACGA CAACGGTTAC GACATCAGCG ACTATCAGGG AATTGAGCCG
GTCTTCGGCA CCCTGTCCGA TTTCGACGAG TTGCTGGCCG GGGTCCACGA CCGCGGCATG
CGACTGGTGA TGGACTTGGT CGTCAATCAC ACCTCCGACG AGCACCCGTG GTTCGTCGAA
TCACGGGCTG ACCCGGCCGG TCCCCGCCGG GACTGGTACT GGTGGCGCGG CGCTCGTCCG
GGGATGGCGC CCGGTGCGCC CGGGGCCGAG CCGACCAACT GGGCCTCGTT CTTCAGCGGT
CCGGCCTGGG AATTCGACGA GGCCAGCGGC GAGTACTACC TGCATCTTTT CTCCCGCAAA
CAGCCCGACC TGAATTGGGA GAATCCGGAC GTCCGCCAGG CCGTCTACGC GATGATGCGT
TGGTGGCTCG ACCGCGGGGT CGACGGTTTC CGCATGGACG TCATCAACAT GATTTCCAAG
CAGCTGCCGC TGGCCGACGG GCCGGTGACG CACGGCGTTC TCGGCGACGG CTCGGCCCTG
TTCCAATGCG GACCGCGTAT TCACGAGTTC CTGCAGGAAA TGCACGAGCA GGTATTCGCC
GGCCGGCCCG AACACGTGCT GACCGTCGGC GAGATGCCCG GGGTGACGGT CGAGGAGGCC
GTGCTGTTCA CCGATCCGCA GCGGCGCGAG GTCGACATGG TCTTCCAGTT CGAACATGTC
AGCCTCGACC AGGGTCCGGG CGGGAAATGG GATATCCGGC CCTTGCGCCT GCTGGACCTG
AAGGCCAGCC TGGGTCGCTG GCAGGCGGGA TTGGCCGAGC GCGGCTGGAA CAGCCTGTAC
TGGGACAACC ACGACCAGCC CCGGGCGGTG TCGCGATTCG GCGACGACGG CCGGTACCGG
ACCGAATCGG CGAAAATGTT GGCCACGGTG CTGCACCTGC ACCGCGGGAC GCCCTACATC
TACCAGGGCG AAGAACTGGG CATGACGAAC GTGCCGTTCG CCGGCCCGGA GGATTTCCGG
GACATCGAAT CGGTCAACTA CTACGCAAGC GCGGTGGCCG GTGGCGCGGA TCCCGCGGCG
GTGCTGGCGG CCCTGCGGCC GCTGAGCCGG GACAACGCCC GCACCCCGAT GCACTGGGAC
GATTCGCCGG CCGCCGGATT CAGCACCGGT GAGCCGTGGA TCGCCGTCAA TCCCAATTAC
CCGCAGATCA ACGCCCGCGC CCAGGTCGAC GATCCGGATT CGGTGTTCTC CCACTACCGG
GCGGTCATCG CGCTGCGGCA CGCCGAACCC GCCGTCGTCG ACGGCGATTT CACCATGCTG
CTGCCGGACG ACCCGACCGT GTACGCGTTC ACCCGGTCGT TGGCCGGCAC GACGCTGCTC
GTGGTGGCGA ATTTCTCCGG CGACCCGGTG CCCGCGCCGG TGCCCGAGGC CGCCCAGTGG
GCCGCCGCCG AATTCGTGCT GGGCAATTAC CCGGCGCCCG ATCCCGCGCC CGATCCGGCA
CCGCCGACCC TGCTGCTCGC GCCGTGGGAG GCCCGGGTGT ACCGGCGCGT CGGGTGA
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| Protein sequence | MAVVSRASGP DWWKRAVVYQ IYPRSFADSD GDGIGDLRGI ISRLDHLARL GVDVIWLSPV
YPSPQDDNGY DISDYQGIEP VFGTLSDFDE LLAGVHDRGM RLVMDLVVNH TSDEHPWFVE
SRADPAGPRR DWYWWRGARP GMAPGAPGAE PTNWASFFSG PAWEFDEASG EYYLHLFSRK
QPDLNWENPD VRQAVYAMMR WWLDRGVDGF RMDVINMISK QLPLADGPVT HGVLGDGSAL
FQCGPRIHEF LQEMHEQVFA GRPEHVLTVG EMPGVTVEEA VLFTDPQRRE VDMVFQFEHV
SLDQGPGGKW DIRPLRLLDL KASLGRWQAG LAERGWNSLY WDNHDQPRAV SRFGDDGRYR
TESAKMLATV LHLHRGTPYI YQGEELGMTN VPFAGPEDFR DIESVNYYAS AVAGGADPAA
VLAALRPLSR DNARTPMHWD DSPAAGFSTG EPWIAVNPNY PQINARAQVD DPDSVFSHYR
AVIALRHAEP AVVDGDFTML LPDDPTVYAF TRSLAGTTLL VVANFSGDPV PAPVPEAAQW
AAAEFVLGNY PAPDPAPDPA PPTLLLAPWE ARVYRRVG
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