| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4893 |
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| Symbol | |
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| ID | 8450523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 5456298 |
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| End bp | 5457302 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645043931 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003204156 |
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| Protein GI | 258655000 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC TCGTCACCGA TCAGGCCCCG GGGCGGACCG CCGGACCCGG CCGGGCCGAG
CTGGAACGCC GGCTGGAGGA CCACCGGCGC GAGCTCGGCG GGTACTGCTA CCGGATGCTG
GGCGCCGCGT TCGAGACCGA CGACGCCGTC CAGGACACGA TGGTGCGGGC CTGGCGAGCC
CTGGACAAGT TCGACGGGCG GTCCTCGCTG CGCACCTGGC TGTACCGCAT CGCCACCAAC
GTGTGCCTGG ATCTGCTGAG CAGCCGCAAC CGGCGCGCCC TGCCGATGGA CTTCGGGCCG
GCGTCGCCCC CGGTCGCCGA ATCGCTGGGT CAACCGCATC CGGAGGCCAC CTGGATCCAG
CCGATGCCGG ACGGCGAGGT ACTGACCGGC ACCGCGGACC CGGCCGATCT GGCCGTGCAG
AAGGACTCGG TCCGGCTGGC CTTCATTGCC GCCCTGCAGC ACCTGCCGCC CCGCCAGCGG
GCCGTGCTCA TCCTGCGCGA GGTGCTGCGC TGGAGCGCGG CGGAGGTGGC CGACCTGCTG
GACAGCACCG TCGCCTCGGT CAACAGCGCA CTCCAGCGGG CCCGGGCCAC CCTGGCCGCC
GTCGACCCGG CGGCCGGGAC CCACGCCGAC CCGATGGACG AGGCGCAGAA GGGCCTGCTG
GCCGATTACG TCAAGGCCTT CACCAGCTAC GACATCGACG CGCTGGTGCT GCTGCTGCGG
CAGGACGCCA CCGCGTCCAT GCCGCCGTTC GCGCTCTGGC TGTCCGGGCG GGACGACATC
GCCGCCTGGC ACCTGGGGCC GGGCGCGGCC TGCCGGCAGT CCAAGCTGAT CGCGCTGGAG
GTCAACGGAT CGCCGGCGTT CGCGGCTTAC AAGCTCGCCG CCGACGGCAC CCACCGGCCC
TTCTCCATCC AGGTGCTCGA CCTGGACGGG GACAAGATCG CCCGGATCAC CTACTTCCTG
GAGACCTCGC TGTTCGCCCG GTTCGGGCTG CCCGCGTCGC TGTAG
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| Protein sequence | MTELVTDQAP GRTAGPGRAE LERRLEDHRR ELGGYCYRML GAAFETDDAV QDTMVRAWRA
LDKFDGRSSL RTWLYRIATN VCLDLLSSRN RRALPMDFGP ASPPVAESLG QPHPEATWIQ
PMPDGEVLTG TADPADLAVQ KDSVRLAFIA ALQHLPPRQR AVLILREVLR WSAAEVADLL
DSTVASVNSA LQRARATLAA VDPAAGTHAD PMDEAQKGLL ADYVKAFTSY DIDALVLLLR
QDATASMPPF ALWLSGRDDI AAWHLGPGAA CRQSKLIALE VNGSPAFAAY KLAADGTHRP
FSIQVLDLDG DKIARITYFL ETSLFARFGL PASL
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