Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4794 |
Symbol | |
ID | 8450424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5332337 |
End bp | 5334001 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645043834 |
Product | helicase domain protein |
Protein accession | YP_003204059 |
Protein GI | 258654903 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.767422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG GACCGTTGAT CGTCCAGTCC GACAAGACGC TGCTGCTGGA GGTGTCCCAC CCGGACGCCC CGGCCGCCCG CGCGAATATT GCCCCGTTCG CCGAACTCGA ACGCTCCCCC GAGCACGTGC ACACCTACCG GATCACCCCG CTGGCGCTGT GGAACGCGCG GGCCGCCGGG CACGACGCCG AGCAGGTGGT CGACGCGCTG GTCCGCTGGT CCCGGTTCCC GGTGCCGCAG GCCCTGCTGG TCGACGTGGT GGACACGATG AGCCGCTACG GCCGGCTGGT ACTGCAGGCC AACCCGGCGC ACGGGCTGAT CCTGGCTTCC CGGGACCGTG CCGTGCTCGA AGAGATCATG CGGCACAAGA AGATCGCCCC GATGCTGGGT GTGCGGATCG ACCCGGACAC CGTGGCGGTC CACCCCTCCC AGCGCGGCCA TCTCAAGCAG CAACTGCTCA AGGTCGGCTG GCCGGCCGAG GACGAGGCCG GCTACGTCGA CGGTGAGGCC CACCCGATCG CCCTGGACAC CACCGACTGG TCGCTGCGCT CGTACCAGCA GGAGGCGGTC GACGGGTTCT GGGACGGTGG GTCCGGCGTG GTGGTGCTGC CCTGTGGGGC CGGCAAGACG CTGGTCGGCG CGGCCGCGAT GGCCAAGGCC CAGGCCACCA CGTTGATCCT GGTCACCAAC ACGGTGTCCG GCCGGCAGTG GAAGCGGGAA CTGATCGCCC GCACCTCGCT GACCGAGGAG GAGATCGGCG AGTACTCCGG CGAGCGCAAG GAGATCCGGC CCGTCACCAT CGCCACCTAT CAGGTGATGA CCCGCAAGTC CGGCGGCCAG TACCGGCACC TGGACCTGTT CGACTCCCGC GACTGGGGGC TGGTCATCTA CGACGAGGTG CACCTGCTGC CGGCGCCGGT GTTCCGGATG ACCGCGGACC TGCAGTCCCG CCGGCGGCTC GGGCTGACCG CCACCCTGGT CCGCGAGGAC GGGCGCGAGG GTGACGTGTT CTCGCTGATC GGACCCAAGC GGTACGACGC GCCGTGGAAG GACATCGAGT CGCAGGGCTG GATCGCGCCG GCCGAGTGCA CCGAGGTCCG GGTCACCCTG ACCGACCACG AACGCCTGAC CTACGCCACC GCCGAGCCCG AGGAGCGGTA CAAGATCGCC TCCACCGCGC GGACCAAGCT GCCGGTGGTG CGCACCGTGC TGGACCGGCA CCCCGGCGAG CCGACCCTGG TCATCGGCGC CTACCTGGAC CAGCTGGAGG AACTGGGCGA GGAGCTGCAG GCGCCGATCA TCCAGGGCTC CACCCGCAAC GCCGAGCGTG AGCGCTTGTT CGACGCGTTC CGGGCCGGCG AGATCAAGAC CCTGGTCGTG TCCAAGGTGG CCAACTTCTC CATCGACCTG CCGGACGCCA CCGTCGCCAT CCAGGTCTCC GGCACCTTCG GCTCGCGGCA GGAGGAGGCG CAGCGGTTGG GCCGGCTGCT GCGACCCAAG GGCGACGGGC GGCAGGCGCA CTTCTACTCG ATCGTCAGCC GGGACACCCT GGACACCGAC TACGCCGCGC ACCGGCAGCG GTTCCTGGCC GAGCAGGGGT ACGCCTACCG CATCGTGGAC GCCGACGACC TGCTCGGCCC GGCGATCCCG GGCGGCGAGG AGTAG
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Protein sequence | MTDGPLIVQS DKTLLLEVSH PDAPAARANI APFAELERSP EHVHTYRITP LALWNARAAG HDAEQVVDAL VRWSRFPVPQ ALLVDVVDTM SRYGRLVLQA NPAHGLILAS RDRAVLEEIM RHKKIAPMLG VRIDPDTVAV HPSQRGHLKQ QLLKVGWPAE DEAGYVDGEA HPIALDTTDW SLRSYQQEAV DGFWDGGSGV VVLPCGAGKT LVGAAAMAKA QATTLILVTN TVSGRQWKRE LIARTSLTEE EIGEYSGERK EIRPVTIATY QVMTRKSGGQ YRHLDLFDSR DWGLVIYDEV HLLPAPVFRM TADLQSRRRL GLTATLVRED GREGDVFSLI GPKRYDAPWK DIESQGWIAP AECTEVRVTL TDHERLTYAT AEPEERYKIA STARTKLPVV RTVLDRHPGE PTLVIGAYLD QLEELGEELQ APIIQGSTRN AERERLFDAF RAGEIKTLVV SKVANFSIDL PDATVAIQVS GTFGSRQEEA QRLGRLLRPK GDGRQAHFYS IVSRDTLDTD YAAHRQRFLA EQGYAYRIVD ADDLLGPAIP GGEE
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