| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4768 |
|---|
| Symbol | |
|---|
| ID | 8450398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 5301932 |
|---|
| End bp | 5303458 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645043808 |
|---|
| Product | PTS system, mannitol-specific IIC subunit |
|---|
| Protein accession | YP_003204033 |
|---|
| Protein GI | 258654877 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component |
|---|
| TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACCG AAGCGGCGCC CGCCAGCAAG ACGTCGAGTA CCCGAGTAGC GGTCCAGAAG
TTCGGCACGT TCCTGTCCGG GATGATCATG CCCAATATCG CGGCGTTCAT CGCGTGGGGT
TTGATCACTG CTCTGTTCAT CGAGAAGGGG CCGTTCCCGA TCGCGGTGAT CGGCGGGTTC
GGTGTCGATG CGGACGGGGT GGCCAATCCG GGGTTGGTCG GGCCGATGGT TCGGTACATG
TTGCCGATCC TGATCGCCGC GCAGGGCGGC CGGATGATCT ACGGGGTGCG TGGCGCGGTG
GTCGCGGTCG TCGCGACGAT GGGCGTGATC ATGTGCACGC CGCAGCCGAT GTTCCTCGGC
GCGATGGTGA TGGGCCCGTT GGCGGCCTGG CTGATGAAGA AGTTGGACTC GGTCTGGGAC
GGCAAGATCA AGCCCGGTTT CGAGATGCTG GTCAACAACT TCTCCGCGGG TTTCCTGTCC
GCCGGGTTGG CCATCGCCAG CTTCTACGTG TTCGGGCCGA TCATCGAGGG TCTGTCCTCG
GCGTTGGGCA CCGGGGTGGA CTGGCTGATC TCGCACAGCT TGTTGCCATT GGCCAGTTTG
ATCATCGAAC CGGCCAAGGT GTTGTTCTTG AACAACGCGA TCAACCATGG GGTGCTGACC
CCGCTGGGCA TCAACCAGTC GGCCGAGACC GGGCAGTCGA TCCTGTTCCT GCTGGAGGCC
AACCCCGGTC CGGGTGTCGG TCTGTTGATC GCGTACTCGA TCTTCGGGAC CGGCCTGGCC
AAGAGCACTG CCCCGGCCGC GGCGATCATC CAGTTCTTCG GTGGGATCCA CGAGATCTAC
TTCCCGTACG TGCTGATGAA GCCGCTGACC CTGATCGCGA CGATCGCCGG CGGCATGGTC
GGCATCTTGA CCCTGACCAT CTTCAACGCC GGATTGCGGG CGCCGGCCGC GCCCGGGTCG
ATCATCGCGG TGTTGATCCA GACACCGGGC AGCAGCCTGG TCGGGGTGTT GTTGTCGGTG
ACGTTGGCCG CGGTGACCAG TTTCGTGATC GCCTCGATCA TCCTCAAGGC CAGTAAGAAG
ACCGAGGAGA GTGGTGATCT CGCGCAGGCC ACGGCCAAGA TGGAAGGGAT GAAGGGCAAG
AAGAGCGCTG TTTCCGGGGT GCTCACCGAC ATCGAGGCGC AGAAGGAGGA GGCCGACGAG
GCCCGCGAGG CCGCGACCCG GTCGGCGCCG ATCCACAAGA TCGTGTTCGC CTGCGACGCC
GGGATGGGTT CGTCCGCGAT GGGTGCCTCG GTGCTGCGGA ACAAGATCAA GAAGGCCGGG
TTCGCCGACA TCACCGTGGT CAACGTGGCC ATCGCGAACC TGGTCGATGA TGTCGATCTG
ATCGTGACCC ATCAGGACCT GACCACCCGG GCTCGGGACA AGGCCCCCCA CGCCCAGCAC
GTCTCGGTGG CCAACTTCAT GAACAGCCCC AAGTACGACG AGATCGTCGA GGAACTGCGG
ACCACCAACG CCGCCGCCTC GAGCTGA
|
|---|
| Protein sequence | MSTEAAPASK TSSTRVAVQK FGTFLSGMIM PNIAAFIAWG LITALFIEKG PFPIAVIGGF
GVDADGVANP GLVGPMVRYM LPILIAAQGG RMIYGVRGAV VAVVATMGVI MCTPQPMFLG
AMVMGPLAAW LMKKLDSVWD GKIKPGFEML VNNFSAGFLS AGLAIASFYV FGPIIEGLSS
ALGTGVDWLI SHSLLPLASL IIEPAKVLFL NNAINHGVLT PLGINQSAET GQSILFLLEA
NPGPGVGLLI AYSIFGTGLA KSTAPAAAII QFFGGIHEIY FPYVLMKPLT LIATIAGGMV
GILTLTIFNA GLRAPAAPGS IIAVLIQTPG SSLVGVLLSV TLAAVTSFVI ASIILKASKK
TEESGDLAQA TAKMEGMKGK KSAVSGVLTD IEAQKEEADE AREAATRSAP IHKIVFACDA
GMGSSAMGAS VLRNKIKKAG FADITVVNVA IANLVDDVDL IVTHQDLTTR ARDKAPHAQH
VSVANFMNSP KYDEIVEELR TTNAAASS
|
|---|
| |