Gene Namu_4660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4660 
Symbol 
ID8450289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5181786 
End bp5182310 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID645043700 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003203926 
Protein GI258654770 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGAT TTCAGGCCGG GGATGAGCGG GCGCTGCGCG AGGCGTACGA CCGCTACGGC 
GGCATGGTGC TGCGAGTGGC CATGCTGCGA CTGGGCAACC ATCACGACGC CGAGGATCTG
GTCCAAATGG TCTTCGTCCG GGCCTGGCGG TTCCGGACGG GCTTTGACCC GTCGAAGGGA
TCGTTGGGAT CGTGGCTGCT CGGCATCACG CGGCGGTTGA TCGCCGACCG CTACGCATCA
CTGGATCGGG ACAAGCGCAT CATCGCGGCG GCCGAGAAGG TCGCCCCGGC GGAGAGCGAG
TCCGCCCCCG CCGACCGGGT CGTCGACCGG GTCGTCGTGG GCAACGAGCT CGACCTGCTC
CCCGAGGAGC AGCGACGGGT GGTTCTGCTC GCGTTCTACG GTGAGCTGAG CCATTCGCAG
ATCGCCGCGA CCACCGGCTT GCCGGTGGGC ACGGTCAAGA GTCATATCCG GCGCGCCCTC
ATCCAGCTGC GCAAGCGTTG GGAGGTGGAT GGTGCCACAT CCTGA
 
Protein sequence
MERFQAGDER ALREAYDRYG GMVLRVAMLR LGNHHDAEDL VQMVFVRAWR FRTGFDPSKG 
SLGSWLLGIT RRLIADRYAS LDRDKRIIAA AEKVAPAESE SAPADRVVDR VVVGNELDLL
PEEQRRVVLL AFYGELSHSQ IAATTGLPVG TVKSHIRRAL IQLRKRWEVD GATS