| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4586 |
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| Symbol | ligB |
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| ID | 8450214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 5107892 |
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| End bp | 5109445 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645043627 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_003203854 |
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| Protein GI | 258654698 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTCG AGCTCGCCAC CACCTCCGCC GCGGTCGGCG CCACCCGGTC CCGACTGGCC
AAGCGGGCCC TGCTGGCCGC CGCGATCCGG GCCGCGGAGC CGGATGAGAT CGGCCTGGTG
GTCACCTACC TGTCGGGTTC GCTGCGGCAG CGGCGCACCG GGGTGGGCTG GGCCTCGTTG
AGCGAGGTAC CCGCGCCCGC CCCCGAGCCG ACCCTGTCGG TCGCCGCGGT GGACGACGCG
TTCGAGCAGA TCGCGGCCAT CGGCGGAGCC GGGTCGGCCG CGGCTCGGGC CGCGGCCGTG
CAGGCCCTGT TCGCCCGGGC CACCGCGGAC GAGCAGCGAT TGCTGCAGGC CTTGGTATTC
GACGAGATCC GTCAGGGGGC GCTGGACGCG CAGGTACAGG ACGGGCTGGC CGAGGCCTTC
GGGGTGCCCG CCGCGGCGGT GCAGCGGGCC GCCATGCTGC TGGGCTCCAC CGCGACCGCC
GCCCGCCTGC TGCAGACCCA GGGGCTGCCG GGATTGCAGT CGGTCGGCCT GCAGGTCGGG
GTGCCGGTCC GGCCGATGCT GGCCGCCGCC GCCCCCGACC CGGCCGCCGC GGTGGACAAG
TCCGGGCTGC CGGCGCTGGT CGACACCAAG CTCGACGGGA TCCGGGTGCA GGTGCACAAG
GACGGCGACA CGATCGCGCT GTACACCCGC ACGCTGGACG AGATCACCGA CCGGCTGCCG
GAGGTGGTGC GGGTGATCGC CGACCTGCCG GCCCGCCGGC TGGTGCTCGA CGGGGAGGTG
CTGGCCCTGG ACGCCGCCGG CCGTCCGGTG GCGTTCCAGC TGATCGCCTC GCGGACGATG
ACCAAGTCCC CGACCGATGG ACCGCCGCTG CCCCTGACGC TGTTCTGTTT CGACCTGCTG
CACGTGGACG GCCGCGACCT GCTCGACGAG CCGCTGTCCG AACGGGCCGC CGTGATGAAC
ACCGTGCTGC CCCCGTCGCT GATCGTGCCG CGCACCGTCG CCCCCGACCT GGCCGCGGTG
CAGGCGGCCT TCGCCGGCGC GGTCGGCGCC GGGTTCGAGG GAGCGGTGGT CAAGAAGCTG
CACGCCCCCT ACGCCGCCGG TCGACGCGAC TCCGGCTGGA TCAAGCTCAA ACCGCGGCAC
ACCTTCGACC TGGCCGTCAT CGCCGCCGAG TGGGGGTACG GGCGGCGCCA GGGCTGGCTC
TCAAATCTGC ACCTGGCCGC GCGCGACCCA CGGACCGGTG AGCTGGTGAT GCTCGGCAAG
ACCTTCAAGG GCCTGACCGA CGCGACCCTG ACCTGGCAGA CCGAACAGTT CCTGGCCCGC
GAGGTCCGGC GCACCAAGAG CACGGTGTTC GTCGAACCGC CGCTGGTCGC GGAGATCGCC
ATCGACGGGG TGCAGGCCTC CACCCGCTAC CCCGGTGGCA TCGCCCTGCG CTTCGCCCGG
GTGCTGCGGT ACCGGCCGGA CAAGACACCG GACGAGGTCG ACAGCCTGGA CGCCGTCGTC
GCCCTCGGCG CGGCCCCGGC GGGGCCGGAC CCGGACGCGG CCGGGTCAGC CTGA
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| Protein sequence | MFVELATTSA AVGATRSRLA KRALLAAAIR AAEPDEIGLV VTYLSGSLRQ RRTGVGWASL
SEVPAPAPEP TLSVAAVDDA FEQIAAIGGA GSAAARAAAV QALFARATAD EQRLLQALVF
DEIRQGALDA QVQDGLAEAF GVPAAAVQRA AMLLGSTATA ARLLQTQGLP GLQSVGLQVG
VPVRPMLAAA APDPAAAVDK SGLPALVDTK LDGIRVQVHK DGDTIALYTR TLDEITDRLP
EVVRVIADLP ARRLVLDGEV LALDAAGRPV AFQLIASRTM TKSPTDGPPL PLTLFCFDLL
HVDGRDLLDE PLSERAAVMN TVLPPSLIVP RTVAPDLAAV QAAFAGAVGA GFEGAVVKKL
HAPYAAGRRD SGWIKLKPRH TFDLAVIAAE WGYGRRQGWL SNLHLAARDP RTGELVMLGK
TFKGLTDATL TWQTEQFLAR EVRRTKSTVF VEPPLVAEIA IDGVQASTRY PGGIALRFAR
VLRYRPDKTP DEVDSLDAVV ALGAAPAGPD PDAAGSA
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