Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4552 |
Symbol | |
ID | 8450180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5064496 |
End bp | 5066187 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645043593 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_003203820 |
Protein GI | 258654664 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGT TCTCCGACGC CCTGTGCACA GCGGCGCAGG GCCCCACCGG CATGACCACT GGCGAGCCGC ATGAGCCGGT TCGCACGTCC TGGGCCGATG TCCACGCCAA GGCCTGCGCC GGGGCGCGGG TGCTGGCCGC CCACGGGATC GGGCCGGGTG ACGCGGTCGC GGTGCTGGCC GCCAAGCCGT TCGAGGTGGC CCCGATCGCC CAGGCGGCCT GGTTGGCCGG GGCCTCGGTG ACGATGCTGC ACCAGCCCAC CGCCCGGACC AATCTGATGA CCTACGCGCA GGACACGGCC GCGGTGCTGT CCCTGGTCGG GGCCAAGGCA GCCGTGCTGG GCGACCCGTT CACCGAGTTC GCGGAACTGT TGGACGGTTC GGGCGTGCTC GCGCTGACCG TCGACGATCT GCTGGCCGAG CCCGGCGGTC CGGCTCCGGA CGTCGAGATC GGCGAGGACC TGCCGGCCCT GCTGCAGCTG ACCTCCGGGT CGACCTCGAC CCCCAAGGCC GTGCGGATCA CCCACCGCAA CCTGTGGGCC AACATCGAGG CGATGTGCCA GGCGGCCCAG ATCCGGCCGG GCGAGGTGAT GGTGTCCTGG TTGCCGCTGT TCCACGACAT GGGCATGGTC GGCTTCCTGA CCCTGCCGAT GTGCCGGGGC ATCGAGCTGG TCACCGTCAC CCCCACCGAT TTCCTGGCCT CGCCGTTGAT CTGGCCGACG TTGATCAGCA AGTACCGCGG CACCATCACC GCCGCCCCCA ACTTCGCCTT CGCGCTGACT GCGCGGGTGC TGGCCCGGCC GACCACCCGG GAGCTGGGCC TGGACCTGTC CTGCATGCGG TTCGCGCTGA ACGGGGCCGA ACCGATCGAC GTCGCCGCGG TCCGGGCCTT CCTGGCCGCG GGGGCACCGT TCGGGCTCCC GGAGACCGCG GTGGTCTGCG CCTACGGCAT GGCCGAGGCG TCGTTGGCCG TGTCCTTCCA CCCCTGGGGC ACCCCGCTCA AGGTGGACAC CGTCGACGCG CAGGCGTTGG AGATCGCCCG GCGGGCGGTG CCGGCCGAAT CGGGCCGCTC GTTCCCGGTG CTGGGCCCGC CGCTGGACGG GATCGAGGTC GCCGTGCGGG GCCGCGACGG CGCGGTGCTC GGCGACCGCG AGGTCGGGGT GCTGCACCTG CGCGGCGAGT GCATCACCGA GCAGTACCTG ACCGTGGACG GGCCGGTGGC CACCCAGGAT GCCGACAAGT GGCTGGACAC TGGGGATCTC GGCTACCTGG TGGACGGCGA GGTGGTGGTC TGCGGCCGGG TCAAGGACGT GATCATCATG GGTGGGCGCA ACATCTACCC GACCGACATC GAGCGGGTGG CCCAGAGCAT CGACGGCGTT CGAGCGGGTA ACGCGGTCGC GGTGCGGTGG ACGACGCCCA GCGGTCGCGA ATCGTTCGCG GTGGCCGTCG AGTCCCGCGA GGCCGGTGAC CAGGACGCGG CCGAGCGCAT CCGGCAGGCC GTGCGGTCGG CGGTGACCGC CGAGATCGGC GCCCGCCCGG CGACGGTGTC GGTGCTCCCG GTCGGGAGTC TGCCCAAGAC TCCGTCCGGC AAGCTGCAGC GCTCCGCCGC GGCCCGGTTG ATCACGCCAC CGCCGGCCGA GGCGCTGCCG GTTCGGCCCC CGGCGCCCGA GGGTCTGCCG CTGCCCGGCT GA
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Protein sequence | MSAFSDALCT AAQGPTGMTT GEPHEPVRTS WADVHAKACA GARVLAAHGI GPGDAVAVLA AKPFEVAPIA QAAWLAGASV TMLHQPTART NLMTYAQDTA AVLSLVGAKA AVLGDPFTEF AELLDGSGVL ALTVDDLLAE PGGPAPDVEI GEDLPALLQL TSGSTSTPKA VRITHRNLWA NIEAMCQAAQ IRPGEVMVSW LPLFHDMGMV GFLTLPMCRG IELVTVTPTD FLASPLIWPT LISKYRGTIT AAPNFAFALT ARVLARPTTR ELGLDLSCMR FALNGAEPID VAAVRAFLAA GAPFGLPETA VVCAYGMAEA SLAVSFHPWG TPLKVDTVDA QALEIARRAV PAESGRSFPV LGPPLDGIEV AVRGRDGAVL GDREVGVLHL RGECITEQYL TVDGPVATQD ADKWLDTGDL GYLVDGEVVV CGRVKDVIIM GGRNIYPTDI ERVAQSIDGV RAGNAVAVRW TTPSGRESFA VAVESREAGD QDAAERIRQA VRSAVTAEIG ARPATVSVLP VGSLPKTPSG KLQRSAAARL ITPPPAEALP VRPPAPEGLP LPG
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