| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4525 |
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| Symbol | |
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| ID | 8450152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5028050 |
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| End bp | 5031628 |
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| Gene Length | 3579 bp |
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| Protein Length | 1192 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645043565 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_003203793 |
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| Protein GI | 258654637 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTCGG GTTCCCTGCG TGGTCTGCTG GCGGCGGTAT CGGCGGACCC TTTCTTCGCC
GCGATGAACG AAGCCACGGG GTCGATCACC CATCGGGTGA CGGGTCCCCC CGCCATTCGT
CCGTTCGTGG TGGGGACCCT GGCCGCCGGC TACCCGGACG CCGGCGTGCC GGTGTTGCTG
GTGACCGCGA CCGGCCGGGA GGCTGAAGCC GCGGTCGCCT CGATCGGTGA CCTGATCGGC
GACGACCGGG TGGCCCTGTT CCCGTCGTGG GAGACCCTGC CGCACGAGCG GCTCTCGCCC
CGCGCGGACA CCGTCGGCCG CCGGCTGGCC ACCCTGCGCC GTCTTGCGCA CCCGGAGGAA
CACCCGGGCG GTTACCCCGC GGTGGTGGTG GCCACGATCC GGTCGATGAT CCAGCCAATG
GCTCCGCATC TGGGCGAGAT GGCGCCGGTG ACCCTGCGGG TGGGCCAGGA AGTTGACCTG
ACCGAGCTGG TCGACCGGCT GGTCTCGCTG GCCTACGGCC GGGTCGACAT GGTCGAGAAG
CGTGGCGAAA TCGCGGTCCG CGGCGGCATT CTGGACATCT TCCCGCCCAC CGCCGACCAT
CCGATACGGG TCGAGTTCTG GGGTGACGAG ATTTCCGATT TGCGCACTTT CGGGGTCACC
GACCAGCGGT CCCTGGGTGC GGTCGAGCAG GTCGTGGCCC CGCCCTGCCG GGAGATCCTG
CTGACGGCCG AGGTGCGGGA GCGCGCCGCG CAGCTGTCCG CCCAGCAGAC CGGCGATCCG
ACCCTGGCCC AGATGCTGGA CAACCTGGCC AACGGCATCA CCGTGGAGGG GATGGAATCG
CTCATCCCGG TACTGGTCGG GGACGATCTC GAGCTGCTGC CCAACCTGGT CCGGCCCGGC
ACGCACGTGG TGCTGGCCGA TCCGGAGCGC ATCCGGACCC GGGCCGCGGA CCTGGTCCGG
ACCGGGGAGG AGTTTTTGGC CGCATCCTGG ATGGCGGCGG CCACCGGCGG CCGGGCGCCG
ATCGACCTCG GGTCGTCGGC TTACCGGTCG CTGGCCGAGG TTCTCGACGT CGTTCGGGAC
GCCGAGCTGC CGATCTGGCG GGTGGCCTCC TTCGAGTCCG GGGAGGCGCT GCAGGAGTCG
GACAGCCCGG CCGTGCTGGG CGCACCCGCC TATCGGGGCG AGCTGGCGTC CGCGATCCAC
GACGCCCGGG AGCGGCAGGC CGCAGGCGGA TCGACCGTGG TGGTGGTGGC CGGGGCCGGC
ACCGCCGCCC GGGCAGGGGA GCGGCTGGCC GAGGCCGACA TGGGCGTCGT GGTGGCCGAG
CAGCTGACCG AACCGCCGCG CAGTGACGTC GTCACCGTGA CCTGCGGGCG CCTCGAGCAC
GGGTTCGTAC TGCGCGAATC GGGCCTGGCC GTGCTGACCG AGGCCGATCT GACCGGCTCG
ACGGGCGTGA ATCCGGAGGC CGCGGCGGCC CGGCTCCCGG CGCGTCGGCG CAACGCGGTC
GACCCGCTCG CGCTCAAACC CGGCGACTAC GTCGTGCATT CGCAGCACGG CATCGGCAAG
TACGTCGACA TGGTGCAGCG CACTTCGGGC GGCGCCACCC GTGAGTACCT GGTCGTCGAG
TACGCCCCGA GCAAGCGCAA CCAGCCCGGC GACCGGCTGT TCGTGCCCAC CGACGCCCTG
GACCAGCTCT CCCGCTATGT CGGGGGCGAG GTGCCGACGC TGAACAAGCT GGGTGGTGCC
GACTGGGCCA AGACCAAGGG CCGGGCCCGT AAGGCCGTCC GGCAGATCGC GGCCAAGCTG
GTCCAGGTGT ACGCGGCGCG GGCCTCCGCA CCTGGGCACG CGTTTGCGCC GGACACCCCG
TGGCAGCGCG AGCTCGAGGA CGCCTTTCCC TACACCGAGA CGCATGATCA GCTCGCGGCG
ATCGACGAGG TCAAGGCGGA CATGGAGCGG GCGGTGCCGA TGGACCGGGT GATCTCCGGC
GACGTGGGGT ACGGCAAGAC GGAGATCGCG GTGCGGGCGG CGTTCAAGGC GGTGCAGGAC
GGCAAGCAGG TGGTGATCCT GGTGCCGACG ACGCTGCTCG CGCAGCAGCA TCTGTCCACC
TTCTCGGAGC GGATGTCGGC GTTCCCGGTG ACGGTGCGTG GGTTGTCGCG GTTCACGTCC
AACGAGCAGG CGGCGCAGAC CGTCAAGGGG TTGGCCGACG GGTCGGTGGA CATCGTCATC
GGCACCCACC GGCTGCTGCA GCCGTCGATC CGCTACAAGG ACCTTGGTCT GGTGGTGGTG
GACGAGGAGC AGCGGTTCGG CGTGGAGCAC AAGGAGCACA TCACCGCGTT GCGGGCGCAC
GTGGACATGC TGACGATGTC GGCGACGCCG ATTCCGCGGA CGTTGGAGAT GAGCCTGGCC
GGGATCCGGG AGATGTCGAC GATCGCGACG CCGCCGGAGG AGCGGCATCC GATCCTGACG
TATGTCGGCG CGTATGACGA GAAGCTGGTG GCGGCGGCGA TCCGGCGGGA GTTGCTGCGC
GAGGGTCAGG TGTTCTACGT GCACAACCGG GTCGCCGACA TCGAGTCGGT GGCCCGCCGG
CTCCGGGAAG CGGTGCCGGA GGCGCGGATC GCGGTGGCGC ACGGGCAGAT GAACGAGGAC
CGGTTGGAGA AGATCATCGA TGGGTTCTGG GCCCGCGAAT GGGACGTGCT GCTGTGCACG
ACCATCGTGG AGACCGGCCT GGACATTTCG AACGCGAACA CGTTGATCGT GGATCACGCG
GAGGTGCTGG GCCTGTCGCA GATGCACCAG CTCCGGGGCC GGGTGGGCCG GGGTCGGGAG
CGCGGGTACG CGTACTTCCT GTATCCGGGG GAGAAGCCGT TGACCGAGAC AGCGCACGAC
CGGCTGGCCA CGATCGCGCA GAACTCGGAT CTGGGGGCGG GGATGGCGGT GGCGATGAAG
GATCTGGAGA TCCGCGGGGC CGGGTCGATC CTGGGTGCCG AGCAGAGCGG GCACATCGCC
GGGGTGGGGT TCGATCTGTA TGTGCGGCTG GTCGGGGAGG CGGTGACGGC GTTCAAGAAG
GCCGCCGCGG CCGCCGGTGA GGAGTTGCAG GAGGAGCCGG TCGAGGTGCG GGTCGACCTG
CCGATCGACG CCAACGTGCC GCACGAGTAC ATCCCGGCCG AGCGGCTGCG GCTGGACGCG
TACCGGCGGA TCGCCGGGGT GGCGTCGAAG GAGGAGGTGG CGGCGGTGCG GGACGAGCTG
ACGGACCGGT ACGGGCCGAT CCCCGAACAG GTGGAGAACC TGCTCGCGGT GGCCGAGTTC
CGGCAGGTGT GCCGGTCGGT GGGGGTGACC GAGGTGACGT TGGGGCCGCC GGGGCTGCGG
ATCGCGCCGA TCGTGTTGCC CGAGTCGGGG CAGCTGCGGA TGGCCCGGCT GTACCCGGGG
TCCAAGTACC GGGCGGCGGC GTCGGTGCTG ACGCTGAAGC CGCCCACCGC GGGCGGCCGG
ATCGGGGCGG CGGCGCTGCG GGATCGGGAG CTGCTGACGT ACCTGGGCCG GGTGCTCGAG
GACATCGCGC CGGTGCCTGC GGGTGCGTCA GCGCGCTGA
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| Protein sequence | MSSGSLRGLL AAVSADPFFA AMNEATGSIT HRVTGPPAIR PFVVGTLAAG YPDAGVPVLL
VTATGREAEA AVASIGDLIG DDRVALFPSW ETLPHERLSP RADTVGRRLA TLRRLAHPEE
HPGGYPAVVV ATIRSMIQPM APHLGEMAPV TLRVGQEVDL TELVDRLVSL AYGRVDMVEK
RGEIAVRGGI LDIFPPTADH PIRVEFWGDE ISDLRTFGVT DQRSLGAVEQ VVAPPCREIL
LTAEVRERAA QLSAQQTGDP TLAQMLDNLA NGITVEGMES LIPVLVGDDL ELLPNLVRPG
THVVLADPER IRTRAADLVR TGEEFLAASW MAAATGGRAP IDLGSSAYRS LAEVLDVVRD
AELPIWRVAS FESGEALQES DSPAVLGAPA YRGELASAIH DARERQAAGG STVVVVAGAG
TAARAGERLA EADMGVVVAE QLTEPPRSDV VTVTCGRLEH GFVLRESGLA VLTEADLTGS
TGVNPEAAAA RLPARRRNAV DPLALKPGDY VVHSQHGIGK YVDMVQRTSG GATREYLVVE
YAPSKRNQPG DRLFVPTDAL DQLSRYVGGE VPTLNKLGGA DWAKTKGRAR KAVRQIAAKL
VQVYAARASA PGHAFAPDTP WQRELEDAFP YTETHDQLAA IDEVKADMER AVPMDRVISG
DVGYGKTEIA VRAAFKAVQD GKQVVILVPT TLLAQQHLST FSERMSAFPV TVRGLSRFTS
NEQAAQTVKG LADGSVDIVI GTHRLLQPSI RYKDLGLVVV DEEQRFGVEH KEHITALRAH
VDMLTMSATP IPRTLEMSLA GIREMSTIAT PPEERHPILT YVGAYDEKLV AAAIRRELLR
EGQVFYVHNR VADIESVARR LREAVPEARI AVAHGQMNED RLEKIIDGFW AREWDVLLCT
TIVETGLDIS NANTLIVDHA EVLGLSQMHQ LRGRVGRGRE RGYAYFLYPG EKPLTETAHD
RLATIAQNSD LGAGMAVAMK DLEIRGAGSI LGAEQSGHIA GVGFDLYVRL VGEAVTAFKK
AAAAAGEELQ EEPVEVRVDL PIDANVPHEY IPAERLRLDA YRRIAGVASK EEVAAVRDEL
TDRYGPIPEQ VENLLAVAEF RQVCRSVGVT EVTLGPPGLR IAPIVLPESG QLRMARLYPG
SKYRAAASVL TLKPPTAGGR IGAAALRDRE LLTYLGRVLE DIAPVPAGAS AR
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