| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4420 |
|---|
| Symbol | |
|---|
| ID | 8450046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4904157 |
|---|
| End bp | 4905326 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645043467 |
|---|
| Product | Cystathionine gamma-synthase |
|---|
| Protein accession | YP_003203696 |
|---|
| Protein GI | 258654540 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTG CCCCCGGTCC CCACGACCCG CAGTCCCCGG GTTTTGCCAC CCGCGCCATC
CACGCCGGCC AGGATCCGGA CCCGCTGACC GGAGCGGTGG CCGTGCCGAT CTACCAGACC
TCGACGTTCG CGCAGGACGA GGTCGGCCAG CCGCGGGCCG GCTACGACTA CTCCCGCGCC
GGCAACCCGA CCCGGACTGC GCTGGAACAG GCGCTGGCCG CCTTGGAGGG GGGTCGCTCG
GGTTTCGCCT TCGCCTCCGG GATGGCCGCC GCCGATACCT ACATCCGCGC CGCGCTGCGA
CCGGGCGACC ACCTGATCCT GCCCGACGAC GCCTACGGCG GCACCTTCCG CCTGGTCGAC
AAGATCTGCG TGCCATGGGG TCTGACCTAC TCGACGGTGT CGCTGGGCGA CCTGGCCGCG
GTCCGCGCGG CGATCCGGCC GACCACCAAG GTCATCTGGT GCGAGACGCC GACCAACCCG
CTGCTGGGCA TCGCCGACAT TGCCGCACTG GCCGAGATCG CCCACGAGAG CGGTGCGAAG
CTGTTGGTGG ACAACACCTT TGCCTCGCCC TACCTGCAGC AGCCGCTGGC TCTGGGAGCC
GACGTGGTGC TGCACTCGAC GACCAAGTAC GTGGGCGGGC ATTCCGACGT GATCGGCGGG
GCGTTGATCG TGGACGACCC GGAGTTGGCC GAGGCCCTGG CCTTCCACAG CAAGTCGATG
GGCGCGGTGC CCGGCCCGGT CGACGCCTGG CTGACCCTGC GCGGCGTGAA AACCCTGGCC
GTGCGGATGG ACCGGCACTG TGACAACGCC GAGCGGGTGG TGGAGCTGCT GGTCGGGCAC
CCCCGGGTGG CCCGGGTCTA CTACCCGGGC CTGCCCGCCC ATCCGGGTCA CGCGATCGCG
GCGCGGCAGA TGCGCCGGTC CGGCGGCATG GTGTCCTTCA GCGTGGTCGG CGGGCAGGAG
GAGGCCCTCA AGGTGTGCCG GCGAACCCAG TTGTTCACGC TGGGGGAGTC GCTCGGTGGG
GTGGAATCGT TGATCGAGCA TCCCGGGCTG ATGACCCACG CCAGCGTCGC CGGCTCCGCG
CTGCAGGTGC CGGACGACTT GATCCGGCTC TCCGTCGGCA TCGAGGACGC CGACGACCTG
CTGGCCGACC TGCGGGACGC CCTCGACTGA
|
|---|
| Protein sequence | MTPAPGPHDP QSPGFATRAI HAGQDPDPLT GAVAVPIYQT STFAQDEVGQ PRAGYDYSRA
GNPTRTALEQ ALAALEGGRS GFAFASGMAA ADTYIRAALR PGDHLILPDD AYGGTFRLVD
KICVPWGLTY STVSLGDLAA VRAAIRPTTK VIWCETPTNP LLGIADIAAL AEIAHESGAK
LLVDNTFASP YLQQPLALGA DVVLHSTTKY VGGHSDVIGG ALIVDDPELA EALAFHSKSM
GAVPGPVDAW LTLRGVKTLA VRMDRHCDNA ERVVELLVGH PRVARVYYPG LPAHPGHAIA
ARQMRRSGGM VSFSVVGGQE EALKVCRRTQ LFTLGESLGG VESLIEHPGL MTHASVAGSA
LQVPDDLIRL SVGIEDADDL LADLRDALD
|
|---|
| |